Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNX27Q96L92 AC025580.3-201ENST00000617932 1424 ntBASIC18.45■□□□□ 0.54
SNX27Q96L92 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.45■□□□□ 0.54
SNX27Q96L92 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNX27Q96L92 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.45■□□□□ 0.54
SNX27Q96L92 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.45■□□□□ 0.54
SNX27Q96L92 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.45■□□□□ 0.54
SNX27Q96L92 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNX27Q96L92 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNX27Q96L92 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.44■□□□□ 0.54
SNX27Q96L92 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SNX27Q96L92 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNX27Q96L92 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.44■□□□□ 0.54
SNX27Q96L92 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SNX27Q96L92 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNX27Q96L92 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNX27Q96L92 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SNX27Q96L92 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SNX27Q96L92 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.44■□□□□ 0.54
SNX27Q96L92 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNX27Q96L92 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNX27Q96L92 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNX27Q96L92 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNX27Q96L92 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.44■□□□□ 0.54
SNX27Q96L92 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.44■□□□□ 0.54
SNX27Q96L92 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.44■□□□□ 0.54
SNX27Q96L92 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.44■□□□□ 0.54
SNX27Q96L92 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.44■□□□□ 0.54
SNX27Q96L92 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.44■□□□□ 0.54
SNX27Q96L92 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.44■□□□□ 0.54
SNX27Q96L92 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.44■□□□□ 0.54
SNX27Q96L92 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.44■□□□□ 0.54
SNX27Q96L92 AC007064.4-201ENST00000637740 555 ntBASIC18.44■□□□□ 0.54
SNX27Q96L92 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNX27Q96L92 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SNX27Q96L92 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNX27Q96L92 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNX27Q96L92 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SNX27Q96L92 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNX27Q96L92 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNX27Q96L92 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.43■□□□□ 0.54
SNX27Q96L92 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
SNX27Q96L92 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNX27Q96L92 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SNX27Q96L92 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNX27Q96L92 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.43■□□□□ 0.54
SNX27Q96L92 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNX27Q96L92 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNX27Q96L92 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SNX27Q96L92 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.43■□□□□ 0.54
SNX27Q96L92 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNX27Q96L92 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.43■□□□□ 0.54
SNX27Q96L92 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNX27Q96L92 AC211486.1-202ENST00000416371 468 ntBASIC18.43■□□□□ 0.54
SNX27Q96L92 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.43■□□□□ 0.54
SNX27Q96L92 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.43■□□□□ 0.54
SNX27Q96L92 AC211476.1-201ENST00000503899 468 ntBASIC18.43■□□□□ 0.54
SNX27Q96L92 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.43■□□□□ 0.54
SNX27Q96L92 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.43■□□□□ 0.54
SNX27Q96L92 AL596442.2-201ENST00000610240 980 ntBASIC18.43■□□□□ 0.54
SNX27Q96L92 AC106028.4-201ENST00000614509 607 ntBASIC18.43■□□□□ 0.54
SNX27Q96L92 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNX27Q96L92 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SNX27Q96L92 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.43■□□□□ 0.54
SNX27Q96L92 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNX27Q96L92 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.43■□□□□ 0.54
SNX27Q96L92 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNX27Q96L92 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SNX27Q96L92 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.42■□□□□ 0.54
SNX27Q96L92 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SNX27Q96L92 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNX27Q96L92 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SNX27Q96L92 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNX27Q96L92 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SNX27Q96L92 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
SNX27Q96L92 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNX27Q96L92 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SNX27Q96L92 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SNX27Q96L92 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNX27Q96L92 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.42■□□□□ 0.54
SNX27Q96L92 BCL2-203ENST00000589955 5011 ntBASIC18.42■□□□□ 0.54
SNX27Q96L92 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNX27Q96L92 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.42■□□□□ 0.54
SNX27Q96L92 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.42■□□□□ 0.54
SNX27Q96L92 ALG1L5P-201ENST00000482043 771 ntBASIC18.42■□□□□ 0.54
SNX27Q96L92 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.42■□□□□ 0.54
SNX27Q96L92 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.42■□□□□ 0.54
SNX27Q96L92 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
SNX27Q96L92 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.42■□□□□ 0.54
SNX27Q96L92 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SNX27Q96L92 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.42■□□□□ 0.54
SNX27Q96L92 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.42■□□□□ 0.54
SNX27Q96L92 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.42■□□□□ 0.54
SNX27Q96L92 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNX27Q96L92 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNX27Q96L92 FRMD8P1-201ENST00000440433 1524 ntBASIC18.42■□□□□ 0.54
SNX27Q96L92 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.42■□□□□ 0.54
SNX27Q96L92 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.42■□□□□ 0.54
SNX27Q96L92 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SNX27Q96L92 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms