Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNIP1Q8TAD8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SNIP1Q8TAD8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.14■□□□□ 0.18
SNIP1Q8TAD8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.14■□□□□ 0.18
SNIP1Q8TAD8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 KRT8P23-201ENST00000560090 1207 ntBASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 AC026150.2-201ENST00000564693 1156 ntBASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 SPDYE22P-201ENST00000582158 798 ntBASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 AC025048.6-201ENST00000634326 1161 ntBASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNIP1Q8TAD8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 AC126763.1-201ENST00000552015 2118 ntBASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 AC008677.1-201ENST00000519230 1561 ntBASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNIP1Q8TAD8 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms