Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.19■□□□□ 0.02
RTTNQ86VV8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.19■□□□□ 0.02
RTTNQ86VV8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTTNQ86VV8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.19■□□□□ 0.02
RTTNQ86VV8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RTTNQ86VV8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RTTNQ86VV8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTTNQ86VV8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTTNQ86VV8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RTTNQ86VV8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.19■□□□□ 0.02
RTTNQ86VV8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.19■□□□□ 0.02
RTTNQ86VV8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RTTNQ86VV8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTTNQ86VV8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.19■□□□□ 0.02
RTTNQ86VV8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RTTNQ86VV8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTTNQ86VV8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTTNQ86VV8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTTNQ86VV8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RTTNQ86VV8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.19■□□□□ 0.02
RTTNQ86VV8 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.19■□□□□ 0.02
RTTNQ86VV8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.19■□□□□ 0.02
RTTNQ86VV8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.19■□□□□ 0.02
RTTNQ86VV8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.19■□□□□ 0.02
RTTNQ86VV8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.19■□□□□ 0.02
RTTNQ86VV8 AC239800.4-201ENST00000603712 296 ntBASIC15.19■□□□□ 0.02
RTTNQ86VV8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.19■□□□□ 0.02
RTTNQ86VV8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.18■□□□□ 0.02
RTTNQ86VV8 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
RTTNQ86VV8 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.18■□□□□ 0.02
RTTNQ86VV8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.18■□□□□ 0.02
RTTNQ86VV8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.18■□□□□ 0.02
RTTNQ86VV8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RTTNQ86VV8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.18■□□□□ 0.02
RTTNQ86VV8 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
RTTNQ86VV8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.18■□□□□ 0.02
RTTNQ86VV8 COX5BP2-201ENST00000392354 334 ntBASIC15.18■□□□□ 0.02
RTTNQ86VV8 MIR940-201ENST00000401276 94 ntBASIC15.18■□□□□ 0.02
RTTNQ86VV8 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.18■□□□□ 0.02
RTTNQ86VV8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.18■□□□□ 0.02
RTTNQ86VV8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.18■□□□□ 0.02
RTTNQ86VV8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.18■□□□□ 0.02
RTTNQ86VV8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.18■□□□□ 0.02
RTTNQ86VV8 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.18■□□□□ 0.02
RTTNQ86VV8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.18■□□□□ 0.02
RTTNQ86VV8 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RTTNQ86VV8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
RTTNQ86VV8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.18■□□□□ 0.02
RTTNQ86VV8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.18■□□□□ 0.02
RTTNQ86VV8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.18■□□□□ 0.02
RTTNQ86VV8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTTNQ86VV8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTTNQ86VV8 AC079776.2-201ENST00000641154 1609 ntBASIC15.17■□□□□ 0.02
RTTNQ86VV8 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RTTNQ86VV8 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTTNQ86VV8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTTNQ86VV8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTTNQ86VV8 FAM197Y8-203ENST00000450145 560 ntBASIC15.17■□□□□ 0.02
RTTNQ86VV8 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.17■□□□□ 0.02
RTTNQ86VV8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.17■□□□□ 0.02
RTTNQ86VV8 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.17■□□□□ 0.02
RTTNQ86VV8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTTNQ86VV8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RTTNQ86VV8 PCDH8P1-201ENST00000428983 2773 ntBASIC15.17■□□□□ 0.02
RTTNQ86VV8 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTTNQ86VV8 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.17■□□□□ 0.02
RTTNQ86VV8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RTTNQ86VV8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTTNQ86VV8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTTNQ86VV8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.17■□□□□ 0.02
RTTNQ86VV8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RTTNQ86VV8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
RTTNQ86VV8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RTTNQ86VV8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RTTNQ86VV8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTTNQ86VV8 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.17■□□□□ 0.02
RTTNQ86VV8 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms