Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 ABCD1P5-201ENST00000445663 754 ntBASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 AD001527.2-201ENST00000622994 785 ntBASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.42■□□□□ 0.38
KHDC1Q4VXA5 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 AC079781.3-201ENST00000449110 356 ntBASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 AC109462.3-201ENST00000573934 613 ntBASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KHDC1Q4VXA5 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 SAPCD2P3-201ENST00000455031 850 ntBASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 AC106795.1-205ENST00000512851 1056 ntBASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 AP000867.4-201ENST00000641616 219 ntBASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
KHDC1Q4VXA5 PMPCAP1-201ENST00000508114 1576 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms