Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
UBE2NP61088 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
UBE2NP61088 AC004706.3-202ENST00000621574 984 ntBASIC15.12■□□□□ 0.01
UBE2NP61088 AC005593.1-201ENST00000624894 515 ntBASIC15.12■□□□□ 0.01
UBE2NP61088 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2NP61088 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2NP61088 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2NP61088 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
UBE2NP61088 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2NP61088 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.12■□□□□ 0.01
UBE2NP61088 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
UBE2NP61088 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2NP61088 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
UBE2NP61088 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
UBE2NP61088 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
UBE2NP61088 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.12■□□□□ 0.01
UBE2NP61088 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2NP61088 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
UBE2NP61088 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2NP61088 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.11■□□□□ 0.01
UBE2NP61088 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2NP61088 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2NP61088 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.11■□□□□ 0.01
UBE2NP61088 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
UBE2NP61088 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2NP61088 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.11■□□□□ 0.01
UBE2NP61088 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
UBE2NP61088 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2NP61088 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2NP61088 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2NP61088 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2NP61088 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2NP61088 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2NP61088 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.11■□□□□ 0.01
UBE2NP61088 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2NP61088 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.11■□□□□ 0.01
UBE2NP61088 AC136632.2-201ENST00000512891 861 ntBASIC15.11■□□□□ 0.01
UBE2NP61088 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.11■□□□□ 0.01
UBE2NP61088 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2NP61088 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.11■□□□□ 0.01
UBE2NP61088 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
UBE2NP61088 MIR7706-201ENST00000613747 67 ntBASIC15.11■□□□□ 0.01
UBE2NP61088 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.11■□□□□ 0.01
UBE2NP61088 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.11■□□□□ 0.01
UBE2NP61088 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
UBE2NP61088 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2NP61088 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
UBE2NP61088 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
UBE2NP61088 LINC00896-202ENST00000609602 2128 ntBASIC15.11■□□□□ 0.01
UBE2NP61088 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.11■□□□□ 0.01
UBE2NP61088 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
UBE2NP61088 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2NP61088 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.11■□□□□ 0.01
UBE2NP61088 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2NP61088 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
UBE2NP61088 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2NP61088 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
UBE2NP61088 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBE2NP61088 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.1■□□□□ 0.01
UBE2NP61088 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBE2NP61088 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBE2NP61088 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBE2NP61088 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
UBE2NP61088 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
UBE2NP61088 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBE2NP61088 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBE2NP61088 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBE2NP61088 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBE2NP61088 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
UBE2NP61088 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBE2NP61088 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
UBE2NP61088 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBE2NP61088 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
UBE2NP61088 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBE2NP61088 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.1■□□□□ 0.01
UBE2NP61088 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.1■□□□□ 0.01
UBE2NP61088 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.1■□□□□ 0.01
UBE2NP61088 AL590627.1-203ENST00000421194 1026 ntBASIC15.1■□□□□ 0.01
UBE2NP61088 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.1■□□□□ 0.01
UBE2NP61088 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.1■□□□□ 0.01
UBE2NP61088 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.1■□□□□ 0.01
UBE2NP61088 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.1■□□□□ 0.01
UBE2NP61088 AL049840.3-201ENST00000602669 611 ntBASIC15.1■□□□□ 0.01
UBE2NP61088 AL356488.2-201ENST00000602755 427 ntBASIC15.1■□□□□ 0.01
UBE2NP61088 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.1■□□□□ 0.01
UBE2NP61088 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.1■□□□□ 0.01
UBE2NP61088 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.1■□□□□ 0.01
UBE2NP61088 AC116407.3-201ENST00000623905 1129 ntBASIC15.1■□□□□ 0.01
UBE2NP61088 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBE2NP61088 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBE2NP61088 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
UBE2NP61088 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
UBE2NP61088 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
UBE2NP61088 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBE2NP61088 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.1■□□□□ 0.01
UBE2NP61088 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBE2NP61088 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBE2NP61088 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
UBE2NP61088 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.1■□□□□ 0.01
UBE2NP61088 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms