Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A2P13942 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL11A2P13942 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
COL11A2P13942 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.68■□□□□ 0.9
COL11A2P13942 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
COL11A2P13942 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.68■□□□□ 0.9
COL11A2P13942 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
COL11A2P13942 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.68■□□□□ 0.9
COL11A2P13942 DGCR5-201ENST00000399539 862 ntBASIC20.68■□□□□ 0.9
COL11A2P13942 CENPM-206ENST00000407253 818 ntTSL 2 BASIC20.68■□□□□ 0.9
COL11A2P13942 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
COL11A2P13942 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL11A2P13942 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.68■□□□□ 0.9
COL11A2P13942 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC20.68■□□□□ 0.9
COL11A2P13942 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL11A2P13942 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.68■□□□□ 0.9
COL11A2P13942 AC009113.1-201ENST00000570267 2443 ntBASIC20.68■□□□□ 0.9
COL11A2P13942 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
COL11A2P13942 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL11A2P13942 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
COL11A2P13942 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL11A2P13942 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL11A2P13942 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL11A2P13942 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.67■□□□□ 0.9
COL11A2P13942 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
COL11A2P13942 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A2P13942 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A2P13942 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A2P13942 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A2P13942 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
COL11A2P13942 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A2P13942 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A2P13942 RPL37AP1-201ENST00000412502 279 ntBASIC20.67■□□□□ 0.9
COL11A2P13942 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.67■□□□□ 0.9
COL11A2P13942 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A2P13942 MTND6P24-201ENST00000440466 518 ntBASIC20.67■□□□□ 0.9
COL11A2P13942 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.67■□□□□ 0.9
COL11A2P13942 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC20.67■□□□□ 0.9
COL11A2P13942 ZNF890P-202ENST00000530367 1156 ntBASIC20.67■□□□□ 0.9
COL11A2P13942 AL512361.1-201ENST00000554200 418 ntBASIC20.67■□□□□ 0.9
COL11A2P13942 AC007431.3-201ENST00000623221 587 ntBASIC20.67■□□□□ 0.9
COL11A2P13942 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A2P13942 AC098818.2-201ENST00000564925 2320 ntBASIC20.67■□□□□ 0.9
COL11A2P13942 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A2P13942 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.67■□□□□ 0.9
COL11A2P13942 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A2P13942 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A2P13942 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A2P13942 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A2P13942 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A2P13942 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.67■□□□□ 0.9
COL11A2P13942 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A2P13942 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A2P13942 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A2P13942 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
COL11A2P13942 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A2P13942 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A2P13942 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.67■□□□□ 0.9
COL11A2P13942 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.67■□□□□ 0.9
COL11A2P13942 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A2P13942 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
COL11A2P13942 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL11A2P13942 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
COL11A2P13942 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
COL11A2P13942 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
COL11A2P13942 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.66■□□□□ 0.9
COL11A2P13942 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
COL11A2P13942 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL11A2P13942 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL11A2P13942 TMEM14DP-201ENST00000422205 345 ntBASIC20.66■□□□□ 0.9
COL11A2P13942 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.66■□□□□ 0.9
COL11A2P13942 AC119751.2-201ENST00000504529 210 ntBASIC20.66■□□□□ 0.9
COL11A2P13942 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.66■□□□□ 0.9
COL11A2P13942 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.66■□□□□ 0.9
COL11A2P13942 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.66■□□□□ 0.9
COL11A2P13942 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL11A2P13942 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.66■□□□□ 0.9
COL11A2P13942 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
COL11A2P13942 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL11A2P13942 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL11A2P13942 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL11A2P13942 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL11A2P13942 AC012317.2-201ENST00000623305 2251 ntBASIC20.65■□□□□ 0.9
COL11A2P13942 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL11A2P13942 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL11A2P13942 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.65■□□□□ 0.9
COL11A2P13942 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL11A2P13942 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL11A2P13942 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.65■□□□□ 0.9
COL11A2P13942 AL353705.2-201ENST00000428243 662 ntBASIC20.65■□□□□ 0.9
COL11A2P13942 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL11A2P13942 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.65■□□□□ 0.9
COL11A2P13942 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.65■□□□□ 0.9
COL11A2P13942 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
COL11A2P13942 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.65■□□□□ 0.9
COL11A2P13942 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.65■□□□□ 0.9
COL11A2P13942 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.65■□□□□ 0.9
COL11A2P13942 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.65■□□□□ 0.9
COL11A2P13942 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.65■□□□□ 0.9
COL11A2P13942 AC087499.5-201ENST00000452760 1342 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms