Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
TCRAP04437 AC007950.2-201ENST00000615045 2347 ntBASIC13.1□□□□□ -0.31
TCRAP04437 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
TCRAP04437 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.1□□□□□ -0.31
TCRAP04437 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TCRAP04437 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.1□□□□□ -0.31
TCRAP04437 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
TCRAP04437 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.1□□□□□ -0.31
TCRAP04437 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.1□□□□□ -0.31
TCRAP04437 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC13.1□□□□□ -0.31
TCRAP04437 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.1□□□□□ -0.31
TCRAP04437 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.1□□□□□ -0.31
TCRAP04437 KRT17P2-201ENST00000300992 1314 ntBASIC13.1□□□□□ -0.31
TCRAP04437 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.1□□□□□ -0.31
TCRAP04437 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRAP04437 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.1□□□□□ -0.31
TCRAP04437 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.09□□□□□ -0.31
TCRAP04437 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
TCRAP04437 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 AL353692.3-201ENST00000407031 1396 ntBASIC13.09□□□□□ -0.31
TCRAP04437 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.09□□□□□ -0.31
TCRAP04437 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.09□□□□□ -0.31
TCRAP04437 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.09□□□□□ -0.31
TCRAP04437 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 IGHGP-201ENST00000390555 1178 ntBASIC13.09□□□□□ -0.31
TCRAP04437 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
TCRAP04437 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TCRAP04437 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.09□□□□□ -0.31
TCRAP04437 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.09□□□□□ -0.31
TCRAP04437 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.09□□□□□ -0.31
TCRAP04437 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.09□□□□□ -0.31
TCRAP04437 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC13.09□□□□□ -0.31
TCRAP04437 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.09□□□□□ -0.31
TCRAP04437 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.09□□□□□ -0.31
TCRAP04437 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC13.09□□□□□ -0.31
TCRAP04437 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.09□□□□□ -0.31
TCRAP04437 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.09□□□□□ -0.31
TCRAP04437 AC109462.3-201ENST00000573934 613 ntBASIC13.09□□□□□ -0.31
TCRAP04437 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
TCRAP04437 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
TCRAP04437 AC019129.2-201ENST00000609837 1235 ntBASIC13.09□□□□□ -0.31
TCRAP04437 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.09□□□□□ -0.31
TCRAP04437 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.09□□□□□ -0.31
TCRAP04437 AC141257.4-201ENST00000634557 245 ntBASIC13.09□□□□□ -0.31
TCRAP04437 AC136944.6-201ENST00000634818 245 ntBASIC13.09□□□□□ -0.31
TCRAP04437 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.09□□□□□ -0.31
TCRAP04437 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.09□□□□□ -0.31
TCRAP04437 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
TCRAP04437 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.09□□□□□ -0.31
TCRAP04437 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TCRAP04437 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
TCRAP04437 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TCRAP04437 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
TCRAP04437 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
TCRAP04437 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TCRAP04437 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
TCRAP04437 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms