Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.18■□□□□ 0.18
CLDN4O14493 AC092910.1-201ENST00000482027 1129 ntBASIC16.18■□□□□ 0.18
CLDN4O14493 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN4O14493 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN4O14493 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CLDN4O14493 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.18■□□□□ 0.18
CLDN4O14493 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.18■□□□□ 0.18
CLDN4O14493 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.18■□□□□ 0.18
CLDN4O14493 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CLDN4O14493 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CLDN4O14493 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.18■□□□□ 0.18
CLDN4O14493 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.18■□□□□ 0.18
CLDN4O14493 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN4O14493 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN4O14493 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN4O14493 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN4O14493 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CLDN4O14493 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN4O14493 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CLDN4O14493 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN4O14493 PP12613-201ENST00000424958 2230 ntBASIC16.18■□□□□ 0.18
CLDN4O14493 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN4O14493 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN4O14493 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN4O14493 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN4O14493 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN4O14493 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN4O14493 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN4O14493 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN4O14493 AC006504.4-201ENST00000592118 1568 ntBASIC16.17■□□□□ 0.18
CLDN4O14493 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN4O14493 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN4O14493 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CLDN4O14493 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN4O14493 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN4O14493 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
CLDN4O14493 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN4O14493 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN4O14493 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CLDN4O14493 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN4O14493 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN4O14493 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CLDN4O14493 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN4O14493 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN4O14493 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.17■□□□□ 0.18
CLDN4O14493 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN4O14493 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CLDN4O14493 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN4O14493 RNA5SP419-201ENST00000515908 135 ntBASIC16.17■□□□□ 0.18
CLDN4O14493 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN4O14493 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN4O14493 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN4O14493 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN4O14493 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN4O14493 GGTLC5P-201ENST00000617623 998 ntBASIC16.17■□□□□ 0.18
CLDN4O14493 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN4O14493 AC116407.3-201ENST00000623905 1129 ntBASIC16.17■□□□□ 0.18
CLDN4O14493 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.17■□□□□ 0.18
CLDN4O14493 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN4O14493 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
CLDN4O14493 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN4O14493 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN4O14493 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN4O14493 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
CLDN4O14493 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN4O14493 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN4O14493 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN4O14493 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CLDN4O14493 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN4O14493 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN4O14493 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN4O14493 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN4O14493 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
CLDN4O14493 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CLDN4O14493 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN4O14493 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN4O14493 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN4O14493 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN4O14493 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CLDN4O14493 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN4O14493 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN4O14493 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CLDN4O14493 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN4O14493 AP002414.1-201ENST00000391405 1147 ntBASIC16.16■□□□□ 0.18
CLDN4O14493 AC073621.1-201ENST00000392730 636 ntBASIC16.16■□□□□ 0.18
CLDN4O14493 ELK2BP-201ENST00000415014 1224 ntBASIC16.16■□□□□ 0.18
CLDN4O14493 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CLDN4O14493 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
CLDN4O14493 AC012640.2-201ENST00000561606 901 ntBASIC16.16■□□□□ 0.18
CLDN4O14493 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN4O14493 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.16■□□□□ 0.18
CLDN4O14493 MIR7706-201ENST00000613747 67 ntBASIC16.16■□□□□ 0.18
CLDN4O14493 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CLDN4O14493 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN4O14493 AL805961.1-202ENST00000641562 540 ntBASIC16.16■□□□□ 0.18
CLDN4O14493 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN4O14493 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN4O14493 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CLDN4O14493 LTB4R2-202ENST00000528054 3092 ntBASIC16.16■□□□□ 0.18
CLDN4O14493 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms