Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 FAM8A3P-201ENST00000427218 844 ntBASIC19.83■□□□□ 0.77
USP17L11C9JVI0 AC140658.5-201ENST00000438532 169 ntBASIC19.83■□□□□ 0.77
USP17L11C9JVI0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
USP17L11C9JVI0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.83■□□□□ 0.77
USP17L11C9JVI0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.83■□□□□ 0.77
USP17L11C9JVI0 AC107918.2-201ENST00000530817 355 ntBASIC19.83■□□□□ 0.77
USP17L11C9JVI0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
USP17L11C9JVI0 AC025678.2-201ENST00000562061 970 ntBASIC19.83■□□□□ 0.77
USP17L11C9JVI0 AC011467.4-201ENST00000594891 528 ntBASIC19.83■□□□□ 0.77
USP17L11C9JVI0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
USP17L11C9JVI0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP17L11C9JVI0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP17L11C9JVI0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.83■□□□□ 0.76
USP17L11C9JVI0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP17L11C9JVI0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.83■□□□□ 0.76
USP17L11C9JVI0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP17L11C9JVI0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP17L11C9JVI0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
USP17L11C9JVI0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP17L11C9JVI0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.82■□□□□ 0.76
USP17L11C9JVI0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP17L11C9JVI0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP17L11C9JVI0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
USP17L11C9JVI0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.82■□□□□ 0.76
USP17L11C9JVI0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.82■□□□□ 0.76
USP17L11C9JVI0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
USP17L11C9JVI0 AL671277.1-201ENST00000429656 993 ntBASIC19.82■□□□□ 0.76
USP17L11C9JVI0 TIMM8BP1-201ENST00000452384 211 ntBASIC19.82■□□□□ 0.76
USP17L11C9JVI0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
USP17L11C9JVI0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
USP17L11C9JVI0 AC109322.1-201ENST00000524499 1264 ntBASIC19.82■□□□□ 0.76
USP17L11C9JVI0 FAM86C2P-203ENST00000528684 1004 ntBASIC19.82■□□□□ 0.76
USP17L11C9JVI0 AC026120.1-201ENST00000611536 926 ntBASIC19.82■□□□□ 0.76
USP17L11C9JVI0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.82■□□□□ 0.76
USP17L11C9JVI0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP17L11C9JVI0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP17L11C9JVI0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.82■□□□□ 0.76
USP17L11C9JVI0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP17L11C9JVI0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP17L11C9JVI0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP17L11C9JVI0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 LINC00628-201ENST00000628516 1289 ntBASIC19.81■□□□□ 0.76
USP17L11C9JVI0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
USP17L11C9JVI0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP17L11C9JVI0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
USP17L11C9JVI0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP17L11C9JVI0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
USP17L11C9JVI0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.8■□□□□ 0.76
USP17L11C9JVI0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.8■□□□□ 0.76
USP17L11C9JVI0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.8■□□□□ 0.76
USP17L11C9JVI0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.8■□□□□ 0.76
USP17L11C9JVI0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.8■□□□□ 0.76
USP17L11C9JVI0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
USP17L11C9JVI0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP17L11C9JVI0 AL355306.1-201ENST00000415580 579 ntBASIC19.8■□□□□ 0.76
USP17L11C9JVI0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP17L11C9JVI0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.8■□□□□ 0.76
USP17L11C9JVI0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
USP17L11C9JVI0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.8■□□□□ 0.76
USP17L11C9JVI0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
USP17L11C9JVI0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.8■□□□□ 0.76
USP17L11C9JVI0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.8■□□□□ 0.76
USP17L11C9JVI0 AC099522.2-201ENST00000607001 744 ntBASIC19.8■□□□□ 0.76
USP17L11C9JVI0 AC093512.1-201ENST00000617969 520 ntBASIC19.8■□□□□ 0.76
USP17L11C9JVI0 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP17L11C9JVI0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms