Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
MKS1Q9NXB0 AL365203.3-201ENST00000609742 2057 ntBASIC16.97■□□□□ 0.31
MKS1Q9NXB0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 RNF152P1-201ENST00000397754 604 ntBASIC16.96■□□□□ 0.31
MKS1Q9NXB0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 AC006538.1-201ENST00000567905 1585 ntBASIC16.96■□□□□ 0.31
MKS1Q9NXB0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
MKS1Q9NXB0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.96■□□□□ 0.3
MKS1Q9NXB0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
MKS1Q9NXB0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
MKS1Q9NXB0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
MKS1Q9NXB0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.96■□□□□ 0.3
MKS1Q9NXB0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 AC246785.2-201ENST00000432512 513 ntBASIC16.95■□□□□ 0.3
MKS1Q9NXB0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 AC083849.1-201ENST00000615227 514 ntBASIC16.95■□□□□ 0.3
MKS1Q9NXB0 ALOX12P2-203ENST00000570921 1945 ntBASIC16.95■□□□□ 0.3
MKS1Q9NXB0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MKS1Q9NXB0 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MKS1Q9NXB0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.94■□□□□ 0.3
MKS1Q9NXB0 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MKS1Q9NXB0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.94■□□□□ 0.3
MKS1Q9NXB0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MKS1Q9NXB0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MKS1Q9NXB0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
MKS1Q9NXB0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
MKS1Q9NXB0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MKS1Q9NXB0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MKS1Q9NXB0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MKS1Q9NXB0 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MKS1Q9NXB0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MKS1Q9NXB0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MKS1Q9NXB0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.94■□□□□ 0.3
MKS1Q9NXB0 AC009533.2-201ENST00000543664 586 ntBASIC16.94■□□□□ 0.3
MKS1Q9NXB0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.94■□□□□ 0.3
MKS1Q9NXB0 AC011467.2-201ENST00000598425 242 ntBASIC16.94■□□□□ 0.3
MKS1Q9NXB0 AC012306.2-201ENST00000609350 630 ntBASIC16.94■□□□□ 0.3
MKS1Q9NXB0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
MKS1Q9NXB0 AC092364.2-201ENST00000596710 2692 ntBASIC16.94■□□□□ 0.3
MKS1Q9NXB0 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.94■□□□□ 0.3
MKS1Q9NXB0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms