Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RLIMQ9NVW2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RLIMQ9NVW2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.05■□□□□ 0.16
RLIMQ9NVW2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.05■□□□□ 0.16
RLIMQ9NVW2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RLIMQ9NVW2 AC103564.2-201ENST00000432853 1299 ntBASIC16.05■□□□□ 0.16
RLIMQ9NVW2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.05■□□□□ 0.16
RLIMQ9NVW2 TPSP2-201ENST00000561760 610 ntBASIC16.05■□□□□ 0.16
RLIMQ9NVW2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RLIMQ9NVW2 AP002414.4-201ENST00000589764 1148 ntBASIC16.05■□□□□ 0.16
RLIMQ9NVW2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RLIMQ9NVW2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.05■□□□□ 0.16
RLIMQ9NVW2 AC078925.2-201ENST00000624013 1973 ntBASIC16.05■□□□□ 0.16
RLIMQ9NVW2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RLIMQ9NVW2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
RLIMQ9NVW2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RLIMQ9NVW2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RLIMQ9NVW2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.05■□□□□ 0.16
RLIMQ9NVW2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RLIMQ9NVW2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
RLIMQ9NVW2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RLIMQ9NVW2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RLIMQ9NVW2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RLIMQ9NVW2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RLIMQ9NVW2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 DRAXINP1-201ENST00000437611 948 ntBASIC16.04■□□□□ 0.16
RLIMQ9NVW2 TOB2P1-201ENST00000469761 992 ntBASIC16.04■□□□□ 0.16
RLIMQ9NVW2 AC009533.2-201ENST00000543664 586 ntBASIC16.04■□□□□ 0.16
RLIMQ9NVW2 AC111152.3-201ENST00000569699 673 ntBASIC16.04■□□□□ 0.16
RLIMQ9NVW2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 AL358472.4-201ENST00000633140 710 ntBASIC16.04■□□□□ 0.16
RLIMQ9NVW2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RLIMQ9NVW2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 TP73-AS1-210ENST00000637775 1455 ntBASIC16.03■□□□□ 0.16
RLIMQ9NVW2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 KRT18P35-201ENST00000510488 1269 ntBASIC16.03■□□□□ 0.16
RLIMQ9NVW2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 AC011467.2-201ENST00000598425 242 ntBASIC16.03■□□□□ 0.16
RLIMQ9NVW2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.03■□□□□ 0.16
RLIMQ9NVW2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.03■□□□□ 0.16
RLIMQ9NVW2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RLIMQ9NVW2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.02■□□□□ 0.16
RLIMQ9NVW2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.02■□□□□ 0.16
RLIMQ9NVW2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.02■□□□□ 0.16
RLIMQ9NVW2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
RLIMQ9NVW2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RLIMQ9NVW2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms