Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC040169.1-201ENST00000565382 521 ntBASIC17.96■□□□□ 0.47
SMOQ99835 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMOQ99835 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.96■□□□□ 0.47
SMOQ99835 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.96■□□□□ 0.47
SMOQ99835 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.96■□□□□ 0.47
SMOQ99835 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMOQ99835 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.96■□□□□ 0.47
SMOQ99835 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SMOQ99835 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMOQ99835 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.96■□□□□ 0.47
SMOQ99835 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.96■□□□□ 0.47
SMOQ99835 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SMOQ99835 AC129492.6-201ENST00000611383 1305 ntBASIC17.96■□□□□ 0.46
SMOQ99835 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
SMOQ99835 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.95■□□□□ 0.46
SMOQ99835 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMOQ99835 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.95■□□□□ 0.46
SMOQ99835 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.95■□□□□ 0.46
SMOQ99835 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.95■□□□□ 0.46
SMOQ99835 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SMOQ99835 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.95■□□□□ 0.46
SMOQ99835 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.95■□□□□ 0.46
SMOQ99835 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMOQ99835 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMOQ99835 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.95■□□□□ 0.46
SMOQ99835 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.95■□□□□ 0.46
SMOQ99835 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.95■□□□□ 0.46
SMOQ99835 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMOQ99835 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.95■□□□□ 0.46
SMOQ99835 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SMOQ99835 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.95■□□□□ 0.46
SMOQ99835 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.95■□□□□ 0.46
SMOQ99835 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.95■□□□□ 0.46
SMOQ99835 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.95■□□□□ 0.46
SMOQ99835 AL513190.1-201ENST00000621254 727 ntBASIC17.95■□□□□ 0.46
SMOQ99835 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SMOQ99835 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMOQ99835 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMOQ99835 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SMOQ99835 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMOQ99835 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SMOQ99835 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMOQ99835 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.95■□□□□ 0.46
SMOQ99835 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMOQ99835 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.95■□□□□ 0.46
SMOQ99835 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SMOQ99835 LETM1P2-201ENST00000597330 2178 ntBASIC17.94■□□□□ 0.46
SMOQ99835 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMOQ99835 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMOQ99835 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.94■□□□□ 0.46
SMOQ99835 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SMOQ99835 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.94■□□□□ 0.46
SMOQ99835 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMOQ99835 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMOQ99835 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SMOQ99835 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.94■□□□□ 0.46
SMOQ99835 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SMOQ99835 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.94■□□□□ 0.46
SMOQ99835 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SMOQ99835 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.94■□□□□ 0.46
SMOQ99835 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.94■□□□□ 0.46
SMOQ99835 AC004877.2-201ENST00000623941 599 ntBASIC17.94■□□□□ 0.46
SMOQ99835 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMOQ99835 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMOQ99835 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.94■□□□□ 0.46
SMOQ99835 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.94■□□□□ 0.46
SMOQ99835 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SMOQ99835 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.94■□□□□ 0.46
SMOQ99835 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SMOQ99835 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SMOQ99835 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMOQ99835 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMOQ99835 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SMOQ99835 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SMOQ99835 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMOQ99835 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMOQ99835 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMOQ99835 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMOQ99835 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMOQ99835 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
SMOQ99835 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.93■□□□□ 0.46
SMOQ99835 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
SMOQ99835 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.93■□□□□ 0.46
SMOQ99835 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMOQ99835 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMOQ99835 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMOQ99835 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.93■□□□□ 0.46
SMOQ99835 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMOQ99835 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMOQ99835 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMOQ99835 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SMOQ99835 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.93■□□□□ 0.46
SMOQ99835 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.93■□□□□ 0.46
SMOQ99835 AC124947.2-201ENST00000547118 1133 ntBASIC17.93■□□□□ 0.46
SMOQ99835 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.93■□□□□ 0.46
SMOQ99835 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.93■□□□□ 0.46
SMOQ99835 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMOQ99835 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMOQ99835 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMOQ99835 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms