Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 AC117500.6-201ENST00000624871 588 ntBASIC17.61■□□□□ 0.41
RTL3Q8N8U3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTL3Q8N8U3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RTL3Q8N8U3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTL3Q8N8U3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTL3Q8N8U3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTL3Q8N8U3 AC106820.2-201ENST00000563775 3264 ntBASIC17.6■□□□□ 0.41
RTL3Q8N8U3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RTL3Q8N8U3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTL3Q8N8U3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTL3Q8N8U3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.6■□□□□ 0.41
RTL3Q8N8U3 AC098831.1-202ENST00000438821 336 ntBASIC17.6■□□□□ 0.41
RTL3Q8N8U3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.6■□□□□ 0.41
RTL3Q8N8U3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
RTL3Q8N8U3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.6■□□□□ 0.41
RTL3Q8N8U3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RTL3Q8N8U3 AC005593.1-201ENST00000624894 515 ntBASIC17.6■□□□□ 0.41
RTL3Q8N8U3 AF228730.7-201ENST00000641842 219 ntBASIC17.6■□□□□ 0.41
RTL3Q8N8U3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTL3Q8N8U3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTL3Q8N8U3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTL3Q8N8U3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RTL3Q8N8U3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RTL3Q8N8U3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
RTL3Q8N8U3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTL3Q8N8U3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RTL3Q8N8U3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RTL3Q8N8U3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RTL3Q8N8U3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTL3Q8N8U3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RTL3Q8N8U3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL3Q8N8U3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTL3Q8N8U3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTL3Q8N8U3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL3Q8N8U3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTL3Q8N8U3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTL3Q8N8U3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL3Q8N8U3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
RTL3Q8N8U3 PAWRP1-201ENST00000451083 565 ntBASIC17.59■□□□□ 0.41
RTL3Q8N8U3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.59■□□□□ 0.41
RTL3Q8N8U3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.59■□□□□ 0.41
RTL3Q8N8U3 AC008667.4-201ENST00000607370 168 ntBASIC17.59■□□□□ 0.41
RTL3Q8N8U3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.59■□□□□ 0.41
RTL3Q8N8U3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.59■□□□□ 0.41
RTL3Q8N8U3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTL3Q8N8U3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.59■□□□□ 0.41
RTL3Q8N8U3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
RTL3Q8N8U3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.59■□□□□ 0.41
RTL3Q8N8U3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.59■□□□□ 0.41
RTL3Q8N8U3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RTL3Q8N8U3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.58■□□□□ 0.41
RTL3Q8N8U3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RTL3Q8N8U3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
RTL3Q8N8U3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
RTL3Q8N8U3 PI4KAP1-204ENST00000612579 1703 ntBASIC17.58■□□□□ 0.41
RTL3Q8N8U3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RTL3Q8N8U3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RTL3Q8N8U3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RTL3Q8N8U3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RTL3Q8N8U3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RTL3Q8N8U3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RTL3Q8N8U3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTL3Q8N8U3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTL3Q8N8U3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTL3Q8N8U3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTL3Q8N8U3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTL3Q8N8U3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.58■□□□□ 0.4
RTL3Q8N8U3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RTL3Q8N8U3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.58■□□□□ 0.4
RTL3Q8N8U3 AC079776.4-201ENST00000511039 504 ntBASIC17.58■□□□□ 0.4
RTL3Q8N8U3 IGHV3-65-201ENST00000523210 341 ntBASIC17.58■□□□□ 0.4
RTL3Q8N8U3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.58■□□□□ 0.4
RTL3Q8N8U3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTL3Q8N8U3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.58■□□□□ 0.4
RTL3Q8N8U3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.58■□□□□ 0.4
RTL3Q8N8U3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.58■□□□□ 0.4
RTL3Q8N8U3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTL3Q8N8U3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
RTL3Q8N8U3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms