Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RHOQP3-201ENST00000437982 621 ntBASIC18.23■□□□□ 0.51
RNF135Q8IUD6 AC007274.1-201ENST00000439805 662 ntBASIC18.23■□□□□ 0.51
RNF135Q8IUD6 AC023141.5-201ENST00000458585 616 ntBASIC18.23■□□□□ 0.51
RNF135Q8IUD6 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 INGX-202ENST00000489074 768 ntBASIC18.23■□□□□ 0.51
RNF135Q8IUD6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 AC087641.1-201ENST00000557561 1021 ntBASIC18.23■□□□□ 0.51
RNF135Q8IUD6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 NCF1C-201ENST00000438382 1427 ntBASIC18.23■□□□□ 0.51
RNF135Q8IUD6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
RNF135Q8IUD6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RNF135Q8IUD6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.21■□□□□ 0.51
RNF135Q8IUD6 DUX4L27-201ENST00000554796 1261 ntBASIC18.21■□□□□ 0.51
RNF135Q8IUD6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 AC022145.2-201ENST00000598203 171 ntBASIC18.21■□□□□ 0.51
RNF135Q8IUD6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF135Q8IUD6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms