Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 PCDHA12-202ENST00000613593 2588 ntBASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 AC083849.1-201ENST00000615227 514 ntBASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 AC046158.3-201ENST00000624947 2558 ntBASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
MRPL55Q7Z7F7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 TSPY22P-201ENST00000427496 604 ntBASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 AC011840.4-201ENST00000578471 627 ntBASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 AC090616.6-201ENST00000582640 721 ntBASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 AC010460.3-201ENST00000511359 1579 ntBASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
MRPL55Q7Z7F7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC11.09□□□□□ -0.63
MRPL55Q7Z7F7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms