Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.02□□□□□ -0.16
LMO4P61968 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO4P61968 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO4P61968 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.02□□□□□ -0.17
LMO4P61968 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.02□□□□□ -0.17
LMO4P61968 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.02□□□□□ -0.17
LMO4P61968 HCG4-201ENST00000418983 998 ntBASIC14.02□□□□□ -0.17
LMO4P61968 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.02□□□□□ -0.17
LMO4P61968 SPDYE11-202ENST00000450699 704 ntBASIC14.02□□□□□ -0.17
LMO4P61968 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.02□□□□□ -0.17
LMO4P61968 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.02□□□□□ -0.17
LMO4P61968 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.02□□□□□ -0.17
LMO4P61968 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.02□□□□□ -0.17
LMO4P61968 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.02□□□□□ -0.17
LMO4P61968 AC093520.2-201ENST00000561830 333 ntBASIC14.02□□□□□ -0.17
LMO4P61968 AC004449.1-201ENST00000564240 433 ntBASIC14.02□□□□□ -0.17
LMO4P61968 SPDYE9P-201ENST00000570642 692 ntBASIC14.02□□□□□ -0.17
LMO4P61968 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO4P61968 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.02□□□□□ -0.17
LMO4P61968 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO4P61968 SPDYE10P-202ENST00000612005 668 ntBASIC14.02□□□□□ -0.17
LMO4P61968 SPDYE8P-202ENST00000612377 668 ntBASIC14.02□□□□□ -0.17
LMO4P61968 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO4P61968 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LMO4P61968 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
LMO4P61968 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO4P61968 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.02□□□□□ -0.17
LMO4P61968 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.02□□□□□ -0.17
LMO4P61968 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO4P61968 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO4P61968 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LMO4P61968 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO4P61968 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.01□□□□□ -0.17
LMO4P61968 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO4P61968 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.01□□□□□ -0.17
LMO4P61968 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LMO4P61968 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO4P61968 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
LMO4P61968 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO4P61968 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LMO4P61968 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.01□□□□□ -0.17
LMO4P61968 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO4P61968 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO4P61968 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.01□□□□□ -0.17
LMO4P61968 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LMO4P61968 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO4P61968 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LMO4P61968 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LMO4P61968 AKAP8P1-201ENST00000434743 1349 ntBASIC14.01□□□□□ -0.17
LMO4P61968 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO4P61968 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO4P61968 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LMO4P61968 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.01□□□□□ -0.17
LMO4P61968 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LMO4P61968 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO4P61968 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LMO4P61968 TFAMP1-201ENST00000412727 736 ntBASIC14.01□□□□□ -0.17
LMO4P61968 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LMO4P61968 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.01□□□□□ -0.17
LMO4P61968 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LMO4P61968 AC023141.5-201ENST00000458585 616 ntBASIC14.01□□□□□ -0.17
LMO4P61968 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.01□□□□□ -0.17
LMO4P61968 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.01□□□□□ -0.17
LMO4P61968 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LMO4P61968 AC243562.1-201ENST00000560672 389 ntBASIC14.01□□□□□ -0.17
LMO4P61968 AC091167.2-201ENST00000579581 588 ntBASIC14.01□□□□□ -0.17
LMO4P61968 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.01□□□□□ -0.17
LMO4P61968 AL009183.1-201ENST00000603760 355 ntBASIC14.01□□□□□ -0.17
LMO4P61968 AC106028.4-201ENST00000614509 607 ntBASIC14.01□□□□□ -0.17
LMO4P61968 AL161645.1-201ENST00000622716 1255 ntBASIC14.01□□□□□ -0.17
LMO4P61968 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.01□□□□□ -0.17
LMO4P61968 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
LMO4P61968 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO4P61968 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.01□□□□□ -0.17
LMO4P61968 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LMO4P61968 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO4P61968 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO4P61968 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO4P61968 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO4P61968 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LMO4P61968 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
LMO4P61968 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LMO4P61968 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LMO4P61968 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LMO4P61968 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14□□□□□ -0.17
LMO4P61968 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO4P61968 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LMO4P61968 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LMO4P61968 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
LMO4P61968 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LMO4P61968 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LMO4P61968 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO4P61968 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14□□□□□ -0.17
LMO4P61968 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14□□□□□ -0.17
LMO4P61968 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14□□□□□ -0.17
LMO4P61968 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LMO4P61968 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LMO4P61968 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14□□□□□ -0.17
LMO4P61968 AL627223.1-201ENST00000416693 442 ntBASIC14□□□□□ -0.17
LMO4P61968 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms