Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NKX2-1P43699 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.12□□□□□ -0.15
NKX2-1P43699 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NKX2-1P43699 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.12□□□□□ -0.15
NKX2-1P43699 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.12□□□□□ -0.15
NKX2-1P43699 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
NKX2-1P43699 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
NKX2-1P43699 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.12□□□□□ -0.15
NKX2-1P43699 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NKX2-1P43699 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.12□□□□□ -0.15
NKX2-1P43699 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.12□□□□□ -0.15
NKX2-1P43699 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.12□□□□□ -0.15
NKX2-1P43699 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.12□□□□□ -0.15
NKX2-1P43699 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.12□□□□□ -0.15
NKX2-1P43699 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.12□□□□□ -0.15
NKX2-1P43699 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
NKX2-1P43699 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.12□□□□□ -0.15
NKX2-1P43699 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC14.12□□□□□ -0.15
NKX2-1P43699 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.12□□□□□ -0.15
NKX2-1P43699 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.12□□□□□ -0.15
NKX2-1P43699 AC009154.2-201ENST00000621177 724 ntBASIC14.12□□□□□ -0.15
NKX2-1P43699 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NKX2-1P43699 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NKX2-1P43699 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.12□□□□□ -0.15
NKX2-1P43699 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NKX2-1P43699 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.12□□□□□ -0.15
NKX2-1P43699 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
NKX2-1P43699 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NKX2-1P43699 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NKX2-1P43699 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
NKX2-1P43699 KRT89P-201ENST00000620027 1478 ntBASIC14.12□□□□□ -0.15
NKX2-1P43699 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX2-1P43699 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NKX2-1P43699 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
NKX2-1P43699 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-1P43699 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-1P43699 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NKX2-1P43699 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
NKX2-1P43699 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.11□□□□□ -0.15
NKX2-1P43699 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
NKX2-1P43699 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-1P43699 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.11□□□□□ -0.15
NKX2-1P43699 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-1P43699 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.11□□□□□ -0.15
NKX2-1P43699 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-1P43699 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-1P43699 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-1P43699 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-1P43699 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.11□□□□□ -0.15
NKX2-1P43699 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.11□□□□□ -0.15
NKX2-1P43699 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-1P43699 AC009947.2-201ENST00000444014 672 ntBASIC14.11□□□□□ -0.15
NKX2-1P43699 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.11□□□□□ -0.15
NKX2-1P43699 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.11□□□□□ -0.15
NKX2-1P43699 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.11□□□□□ -0.15
NKX2-1P43699 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.11□□□□□ -0.15
NKX2-1P43699 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
NKX2-1P43699 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.11□□□□□ -0.15
NKX2-1P43699 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.11□□□□□ -0.15
NKX2-1P43699 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-1P43699 AC024563.2-201ENST00000603282 481 ntBASIC14.11□□□□□ -0.15
NKX2-1P43699 AC132872.4-202ENST00000622924 2756 ntBASIC14.11□□□□□ -0.15
NKX2-1P43699 AC067930.6-201ENST00000623257 4947 ntBASIC14.11□□□□□ -0.15
NKX2-1P43699 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NKX2-1P43699 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-1P43699 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.11□□□□□ -0.15
NKX2-1P43699 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NKX2-1P43699 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.11□□□□□ -0.15
NKX2-1P43699 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
NKX2-1P43699 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-1P43699 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-1P43699 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-1P43699 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.1□□□□□ -0.15
NKX2-1P43699 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-1P43699 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-1P43699 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
NKX2-1P43699 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms