Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
RFC3P40938 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RFC3P40938 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC3P40938 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC3P40938 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RFC3P40938 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC3P40938 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RFC3P40938 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.76■□□□□ 0.11
RFC3P40938 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.76■□□□□ 0.11
RFC3P40938 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.76■□□□□ 0.11
RFC3P40938 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.76■□□□□ 0.11
RFC3P40938 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.76■□□□□ 0.11
RFC3P40938 AC005104.2-201ENST00000427818 678 ntBASIC15.76■□□□□ 0.11
RFC3P40938 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RFC3P40938 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RFC3P40938 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
RFC3P40938 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.76■□□□□ 0.11
RFC3P40938 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RFC3P40938 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.76■□□□□ 0.11
RFC3P40938 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
RFC3P40938 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.76■□□□□ 0.11
RFC3P40938 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.76■□□□□ 0.11
RFC3P40938 AC008667.4-201ENST00000607370 168 ntBASIC15.76■□□□□ 0.11
RFC3P40938 AL691403.2-201ENST00000618460 490 ntBASIC15.76■□□□□ 0.11
RFC3P40938 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC3P40938 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RFC3P40938 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC3P40938 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC3P40938 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC3P40938 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.76■□□□□ 0.11
RFC3P40938 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
RFC3P40938 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.76■□□□□ 0.11
RFC3P40938 AL355312.1-201ENST00000407115 2176 ntBASIC15.76■□□□□ 0.11
RFC3P40938 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC3P40938 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RFC3P40938 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RFC3P40938 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC3P40938 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC3P40938 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RFC3P40938 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RFC3P40938 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RFC3P40938 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.75■□□□□ 0.11
RFC3P40938 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.75■□□□□ 0.11
RFC3P40938 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC3P40938 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
RFC3P40938 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC3P40938 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.75■□□□□ 0.11
RFC3P40938 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RFC3P40938 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC3P40938 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC3P40938 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC3P40938 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC3P40938 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RFC3P40938 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RFC3P40938 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC3P40938 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC3P40938 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RFC3P40938 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.75■□□□□ 0.11
RFC3P40938 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RFC3P40938 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RFC3P40938 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RFC3P40938 RPS8P6-201ENST00000426177 609 ntBASIC15.75■□□□□ 0.11
RFC3P40938 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RFC3P40938 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.75■□□□□ 0.11
RFC3P40938 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC3P40938 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.75■□□□□ 0.11
RFC3P40938 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.75■□□□□ 0.11
RFC3P40938 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC3P40938 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.75■□□□□ 0.11
RFC3P40938 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.75■□□□□ 0.11
RFC3P40938 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.75■□□□□ 0.11
RFC3P40938 IGHV3-65-201ENST00000523210 341 ntBASIC15.75■□□□□ 0.11
RFC3P40938 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.75■□□□□ 0.11
RFC3P40938 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.75■□□□□ 0.11
RFC3P40938 AL353135.1-201ENST00000606729 504 ntBASIC15.75■□□□□ 0.11
RFC3P40938 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RFC3P40938 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RFC3P40938 AL135999.2-201ENST00000622438 1686 ntBASIC15.75■□□□□ 0.11
RFC3P40938 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RFC3P40938 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.75■□□□□ 0.11
RFC3P40938 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.75■□□□□ 0.11
RFC3P40938 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RFC3P40938 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RFC3P40938 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFC3P40938 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.74■□□□□ 0.11
RFC3P40938 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RFC3P40938 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RFC3P40938 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
RFC3P40938 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.74■□□□□ 0.11
RFC3P40938 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.74■□□□□ 0.11
RFC3P40938 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFC3P40938 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFC3P40938 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFC3P40938 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RFC3P40938 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
RFC3P40938 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFC3P40938 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RFC3P40938 RPSAP43-201ENST00000402237 625 ntBASIC15.74■□□□□ 0.11
RFC3P40938 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.74■□□□□ 0.11
RFC3P40938 UPF3AP3-201ENST00000420996 769 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms