Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MDH1P40925 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.31■□□□□ 0.36
MDH1P40925 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
MDH1P40925 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MDH1P40925 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.31■□□□□ 0.36
MDH1P40925 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.31■□□□□ 0.36
MDH1P40925 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MDH1P40925 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MDH1P40925 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MDH1P40925 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MDH1P40925 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MDH1P40925 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.3■□□□□ 0.36
MDH1P40925 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.3■□□□□ 0.36
MDH1P40925 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
MDH1P40925 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.3■□□□□ 0.36
MDH1P40925 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.3■□□□□ 0.36
MDH1P40925 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MDH1P40925 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.3■□□□□ 0.36
MDH1P40925 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.3■□□□□ 0.36
MDH1P40925 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.3■□□□□ 0.36
MDH1P40925 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MDH1P40925 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.3■□□□□ 0.36
MDH1P40925 AC026366.1-201ENST00000488803 879 ntBASIC17.3■□□□□ 0.36
MDH1P40925 AC097488.1-201ENST00000507834 756 ntBASIC17.3■□□□□ 0.36
MDH1P40925 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.3■□□□□ 0.36
MDH1P40925 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
MDH1P40925 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MDH1P40925 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.3■□□□□ 0.36
MDH1P40925 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MDH1P40925 EGFEM1P-202ENST00000431685 1563 ntBASIC17.3■□□□□ 0.36
MDH1P40925 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
MDH1P40925 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
MDH1P40925 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MDH1P40925 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MDH1P40925 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.3■□□□□ 0.36
MDH1P40925 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MDH1P40925 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MDH1P40925 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.3■□□□□ 0.36
MDH1P40925 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MDH1P40925 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.29■□□□□ 0.36
MDH1P40925 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
MDH1P40925 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MDH1P40925 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MDH1P40925 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.29■□□□□ 0.36
MDH1P40925 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MDH1P40925 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MDH1P40925 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
MDH1P40925 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.29■□□□□ 0.36
MDH1P40925 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MDH1P40925 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
MDH1P40925 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.29■□□□□ 0.36
MDH1P40925 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MDH1P40925 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
MDH1P40925 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.29■□□□□ 0.36
MDH1P40925 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MDH1P40925 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MDH1P40925 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MDH1P40925 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MDH1P40925 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MDH1P40925 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MDH1P40925 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.29■□□□□ 0.36
MDH1P40925 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MDH1P40925 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.29■□□□□ 0.36
MDH1P40925 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.29■□□□□ 0.36
MDH1P40925 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MDH1P40925 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MDH1P40925 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MDH1P40925 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MDH1P40925 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.28■□□□□ 0.36
MDH1P40925 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MDH1P40925 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
MDH1P40925 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
MDH1P40925 AC022532.1-201ENST00000624563 1728 ntBASIC17.28■□□□□ 0.36
MDH1P40925 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MDH1P40925 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MDH1P40925 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.28■□□□□ 0.36
MDH1P40925 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.28■□□□□ 0.36
MDH1P40925 SEC1P-202ENST00000473944 940 ntBASIC17.28■□□□□ 0.36
MDH1P40925 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.28■□□□□ 0.36
MDH1P40925 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.28■□□□□ 0.36
MDH1P40925 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MDH1P40925 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
MDH1P40925 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.28■□□□□ 0.36
MDH1P40925 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MDH1P40925 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
MDH1P40925 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MDH1P40925 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MDH1P40925 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
MDH1P40925 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
MDH1P40925 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
MDH1P40925 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.28■□□□□ 0.36
MDH1P40925 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
MDH1P40925 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
MDH1P40925 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.28■□□□□ 0.36
MDH1P40925 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
MDH1P40925 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MDH1P40925 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.28■□□□□ 0.36
MDH1P40925 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
MDH1P40925 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
MDH1P40925 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms