Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SLC6A4P31645 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.59■□□□□ 0.41
SLC6A4P31645 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC6A4P31645 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLC6A4P31645 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC6A4P31645 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLC6A4P31645 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC6A4P31645 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC6A4P31645 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC6A4P31645 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC6A4P31645 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SLC6A4P31645 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A4P31645 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A4P31645 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A4P31645 KRT18P13-201ENST00000400056 1290 ntBASIC17.58■□□□□ 0.4
SLC6A4P31645 FAM185BP-201ENST00000443595 716 ntBASIC17.58■□□□□ 0.4
SLC6A4P31645 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
SLC6A4P31645 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC6A4P31645 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.58■□□□□ 0.4
SLC6A4P31645 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A4P31645 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.58■□□□□ 0.4
SLC6A4P31645 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC6A4P31645 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC6A4P31645 AC004877.2-201ENST00000623941 599 ntBASIC17.58■□□□□ 0.4
SLC6A4P31645 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC6A4P31645 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A4P31645 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A4P31645 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A4P31645 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC6A4P31645 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
SLC6A4P31645 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC6A4P31645 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A4P31645 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A4P31645 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A4P31645 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A4P31645 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A4P31645 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC6A4P31645 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC6A4P31645 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A4P31645 FRMD8P1-201ENST00000440433 1524 ntBASIC17.57■□□□□ 0.4
SLC6A4P31645 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SLC6A4P31645 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC6A4P31645 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A4P31645 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC6A4P31645 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A4P31645 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A4P31645 AC092053.1-201ENST00000605787 1936 ntBASIC17.57■□□□□ 0.4
SLC6A4P31645 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A4P31645 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A4P31645 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A4P31645 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.57■□□□□ 0.4
SLC6A4P31645 AC004832.2-201ENST00000426397 482 ntBASIC17.57■□□□□ 0.4
SLC6A4P31645 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A4P31645 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC6A4P31645 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC6A4P31645 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.57■□□□□ 0.4
SLC6A4P31645 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.57■□□□□ 0.4
SLC6A4P31645 AC002347.1-201ENST00000569543 541 ntBASIC17.57■□□□□ 0.4
SLC6A4P31645 REXO1L3P-201ENST00000622202 1288 ntBASIC17.57■□□□□ 0.4
SLC6A4P31645 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A4P31645 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A4P31645 LINC02012-201ENST00000608206 1725 ntBASIC17.57■□□□□ 0.4
SLC6A4P31645 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A4P31645 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A4P31645 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A4P31645 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SLC6A4P31645 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.57■□□□□ 0.4
SLC6A4P31645 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A4P31645 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A4P31645 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A4P31645 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC6A4P31645 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A4P31645 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC6A4P31645 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC6A4P31645 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A4P31645 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC6A4P31645 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A4P31645 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC6A4P31645 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC6A4P31645 BCAR1-209ENST00000546196 1340 ntBASIC17.56■□□□□ 0.4
SLC6A4P31645 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC6A4P31645 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SLC6A4P31645 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC6A4P31645 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC6A4P31645 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC6A4P31645 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC6A4P31645 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC6A4P31645 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SLC6A4P31645 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC6A4P31645 KRT19P2-202ENST00000557173 1012 ntBASIC17.56■□□□□ 0.4
SLC6A4P31645 DUX4L17-201ENST00000557360 1267 ntBASIC17.56■□□□□ 0.4
SLC6A4P31645 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC6A4P31645 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC6A4P31645 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC6A4P31645 AC010327.4-202ENST00000591484 748 ntBASIC17.56■□□□□ 0.4
SLC6A4P31645 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC6A4P31645 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC6A4P31645 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC6A4P31645 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SLC6A4P31645 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms