Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.36■□□□□ 0.37
CHRNB1P11230 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.36■□□□□ 0.37
CHRNB1P11230 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.36■□□□□ 0.37
CHRNB1P11230 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB1P11230 RARRES2P8-201ENST00000566335 367 ntBASIC17.36■□□□□ 0.37
CHRNB1P11230 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNB1P11230 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB1P11230 AL035252.4-201ENST00000624174 288 ntBASIC17.36■□□□□ 0.37
CHRNB1P11230 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.36■□□□□ 0.37
CHRNB1P11230 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CHRNB1P11230 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB1P11230 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CHRNB1P11230 AKAP8P1-201ENST00000434743 1349 ntBASIC17.36■□□□□ 0.37
CHRNB1P11230 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB1P11230 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.36■□□□□ 0.37
CHRNB1P11230 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNB1P11230 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHRNB1P11230 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CHRNB1P11230 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CHRNB1P11230 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.36■□□□□ 0.37
CHRNB1P11230 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNB1P11230 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CHRNB1P11230 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CHRNB1P11230 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNB1P11230 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CHRNB1P11230 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNB1P11230 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNB1P11230 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.35■□□□□ 0.37
CHRNB1P11230 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNB1P11230 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNB1P11230 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNB1P11230 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CHRNB1P11230 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.35■□□□□ 0.37
CHRNB1P11230 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNB1P11230 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNB1P11230 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNB1P11230 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.35■□□□□ 0.37
CHRNB1P11230 AC005034.1-201ENST00000426657 489 ntBASIC17.35■□□□□ 0.37
CHRNB1P11230 AC002472.2-201ENST00000442739 958 ntBASIC17.35■□□□□ 0.37
CHRNB1P11230 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CHRNB1P11230 TSPY16P-201ENST00000449843 468 ntBASIC17.35■□□□□ 0.37
CHRNB1P11230 KLF2P3-201ENST00000451977 1087 ntBASIC17.35■□□□□ 0.37
CHRNB1P11230 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNB1P11230 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.35■□□□□ 0.37
CHRNB1P11230 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.35■□□□□ 0.37
CHRNB1P11230 DUX4L17-201ENST00000557360 1267 ntBASIC17.35■□□□□ 0.37
CHRNB1P11230 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.35■□□□□ 0.37
CHRNB1P11230 RN7SL204P-201ENST00000582831 262 ntBASIC17.35■□□□□ 0.37
CHRNB1P11230 MIR4515-201ENST00000584082 81 ntBASIC17.35■□□□□ 0.37
CHRNB1P11230 AC063926.2-201ENST00000623766 1308 ntBASIC17.35■□□□□ 0.37
CHRNB1P11230 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNB1P11230 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.35■□□□□ 0.37
CHRNB1P11230 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNB1P11230 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.35■□□□□ 0.37
CHRNB1P11230 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.35■□□□□ 0.37
CHRNB1P11230 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNB1P11230 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.35■□□□□ 0.37
CHRNB1P11230 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNB1P11230 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNB1P11230 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CHRNB1P11230 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNB1P11230 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CHRNB1P11230 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNB1P11230 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNB1P11230 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNB1P11230 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.34■□□□□ 0.37
CHRNB1P11230 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNB1P11230 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CHRNB1P11230 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNB1P11230 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNB1P11230 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.34■□□□□ 0.37
CHRNB1P11230 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNB1P11230 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNB1P11230 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNB1P11230 MIR661-201ENST00000384842 89 ntBASIC17.34■□□□□ 0.37
CHRNB1P11230 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.34■□□□□ 0.37
CHRNB1P11230 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNB1P11230 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNB1P11230 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNB1P11230 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNB1P11230 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNB1P11230 TERF1P3-201ENST00000505638 1227 ntBASIC17.34■□□□□ 0.37
CHRNB1P11230 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNB1P11230 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNB1P11230 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.34■□□□□ 0.37
CHRNB1P11230 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNB1P11230 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CHRNB1P11230 AC087641.1-201ENST00000557561 1021 ntBASIC17.34■□□□□ 0.37
CHRNB1P11230 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNB1P11230 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.34■□□□□ 0.37
CHRNB1P11230 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.34■□□□□ 0.37
CHRNB1P11230 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.34■□□□□ 0.37
CHRNB1P11230 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNB1P11230 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNB1P11230 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNB1P11230 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNB1P11230 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.34■□□□□ 0.37
CHRNB1P11230 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNB1P11230 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNB1P11230 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms