Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 Z69720.1-201ENST00000601483 472 ntBASIC18.64■□□□□ 0.57
CCDC172P0C7W6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.64■□□□□ 0.57
CCDC172P0C7W6 AL118508.1-201ENST00000613502 2345 ntBASIC18.64■□□□□ 0.57
CCDC172P0C7W6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 AC005332.1-201ENST00000577698 1310 ntBASIC18.64■□□□□ 0.57
CCDC172P0C7W6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC172P0C7W6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 AC060834.1-201ENST00000443027 2032 ntBASIC18.63■□□□□ 0.57
CCDC172P0C7W6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 AC009336.1-201ENST00000608941 1553 ntBASIC18.63■□□□□ 0.57
CCDC172P0C7W6 AC011676.5-201ENST00000624864 2660 ntBASIC18.63■□□□□ 0.57
CCDC172P0C7W6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC172P0C7W6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 SLC25A1P3-201ENST00000395415 828 ntBASIC18.62■□□□□ 0.57
CCDC172P0C7W6 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 AC016734.2-201ENST00000624325 1377 ntBASIC18.62■□□□□ 0.57
CCDC172P0C7W6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC172P0C7W6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 KRT18P1-202ENST00000452408 1331 ntBASIC18.61■□□□□ 0.57
CCDC172P0C7W6 TSSC2-201ENST00000450217 709 ntBASIC18.61■□□□□ 0.57
CCDC172P0C7W6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 FAM86EP-206ENST00000510506 987 ntBASIC18.61■□□□□ 0.57
CCDC172P0C7W6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC172P0C7W6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms