Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAF3IP2O43734 MTDHP4-201ENST00000600287 670 ntBASIC15.33■□□□□ 0.04
TRAF3IP2O43734 AC064862.7-201ENST00000604520 867 ntBASIC15.33■□□□□ 0.04
TRAF3IP2O43734 AL589182.2-201ENST00000619332 1049 ntBASIC15.33■□□□□ 0.04
TRAF3IP2O43734 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP2O43734 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP2O43734 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP2O43734 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP2O43734 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRAF3IP2O43734 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.04
TRAF3IP2O43734 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAF3IP2O43734 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRAF3IP2O43734 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP2O43734 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP2O43734 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP2O43734 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP2O43734 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAF3IP2O43734 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 AC021087.4-201ENST00000563761 564 ntBASIC15.32■□□□□ 0.04
TRAF3IP2O43734 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 AC025062.2-201ENST00000605477 670 ntBASIC15.32■□□□□ 0.04
TRAF3IP2O43734 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAF3IP2O43734 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.31■□□□□ 0.04
TRAF3IP2O43734 AL450487.1-201ENST00000426799 995 ntBASIC15.31■□□□□ 0.04
TRAF3IP2O43734 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 AL139424.1-201ENST00000607572 797 ntBASIC15.31■□□□□ 0.04
TRAF3IP2O43734 TP73-AS1-207ENST00000624167 988 ntBASIC15.31■□□□□ 0.04
TRAF3IP2O43734 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 FRMD8P1-201ENST00000440433 1524 ntBASIC15.31■□□□□ 0.04
TRAF3IP2O43734 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP2O43734 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms