Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AC073592.5-201ENST00000624854 528 ntBASIC16.46■□□□□ 0.23
PCDH17O14917 AC117500.6-201ENST00000624871 588 ntBASIC16.46■□□□□ 0.23
PCDH17O14917 FAM215A-202ENST00000632077 792 ntBASIC16.46■□□□□ 0.23
PCDH17O14917 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH17O14917 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PCDH17O14917 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH17O14917 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH17O14917 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH17O14917 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDH17O14917 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PCDH17O14917 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH17O14917 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDH17O14917 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH17O14917 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH17O14917 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH17O14917 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDH17O14917 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.46■□□□□ 0.23
PCDH17O14917 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCDH17O14917 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PCDH17O14917 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
PCDH17O14917 AL139384.1-201ENST00000612143 3047 ntBASIC16.45■□□□□ 0.22
PCDH17O14917 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH17O14917 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
PCDH17O14917 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH17O14917 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH17O14917 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH17O14917 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDH17O14917 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDH17O14917 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDH17O14917 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH17O14917 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH17O14917 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH17O14917 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH17O14917 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PCDH17O14917 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDH17O14917 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH17O14917 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PCDH17O14917 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDH17O14917 PMS2P1-201ENST00000431037 1228 ntBASIC16.45■□□□□ 0.22
PCDH17O14917 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
PCDH17O14917 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDH17O14917 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDH17O14917 MTDHP4-201ENST00000600287 670 ntBASIC16.45■□□□□ 0.22
PCDH17O14917 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH17O14917 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.45■□□□□ 0.22
PCDH17O14917 PGM5P2-202ENST00000637225 1043 ntBASIC16.45■□□□□ 0.22
PCDH17O14917 AC107918.4-202ENST00000641623 219 ntBASIC16.45■□□□□ 0.22
PCDH17O14917 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PCDH17O14917 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PCDH17O14917 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH17O14917 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH17O14917 AL049757.1-201ENST00000616842 1596 ntBASIC16.45■□□□□ 0.22
PCDH17O14917 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH17O14917 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.45■□□□□ 0.22
PCDH17O14917 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH17O14917 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH17O14917 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH17O14917 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.45■□□□□ 0.22
PCDH17O14917 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
PCDH17O14917 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDH17O14917 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PCDH17O14917 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.45■□□□□ 0.22
PCDH17O14917 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PCDH17O14917 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH17O14917 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH17O14917 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH17O14917 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH17O14917 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH17O14917 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PCDH17O14917 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH17O14917 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH17O14917 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
PCDH17O14917 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
PCDH17O14917 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDH17O14917 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDH17O14917 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH17O14917 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.44■□□□□ 0.22
PCDH17O14917 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH17O14917 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.44■□□□□ 0.22
PCDH17O14917 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PCDH17O14917 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
PCDH17O14917 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PCDH17O14917 AC006557.2-201ENST00000592985 1240 ntBASIC16.44■□□□□ 0.22
PCDH17O14917 AC008735.5-201ENST00000623544 497 ntBASIC16.44■□□□□ 0.22
PCDH17O14917 AF228730.7-201ENST00000641842 219 ntBASIC16.44■□□□□ 0.22
PCDH17O14917 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.44■□□□□ 0.22
PCDH17O14917 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH17O14917 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH17O14917 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH17O14917 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.44■□□□□ 0.22
PCDH17O14917 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDH17O14917 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PCDH17O14917 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PCDH17O14917 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH17O14917 IL9RP2-201ENST00000423948 1312 ntBASIC16.44■□□□□ 0.22
PCDH17O14917 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH17O14917 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PCDH17O14917 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.43■□□□□ 0.22
PCDH17O14917 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PCDH17O14917 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms