Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LINC01546A6NGU7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.12□□□□□ -0.47
LINC01546A6NGU7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 TSPY12P-201ENST00000421279 868 ntBASIC12.12□□□□□ -0.47
LINC01546A6NGU7 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 RARRES2P6-201ENST00000567333 442 ntBASIC12.12□□□□□ -0.47
LINC01546A6NGU7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 CD177P1-201ENST00000606252 935 ntBASIC12.12□□□□□ -0.47
LINC01546A6NGU7 AL137784.2-201ENST00000607332 1000 ntBASIC12.12□□□□□ -0.47
LINC01546A6NGU7 IKBKGP1-201ENST00000612193 1073 ntBASIC12.12□□□□□ -0.47
LINC01546A6NGU7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LINC01546A6NGU7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 PPT1-215ENST00000641471 2368 ntBASIC12.11□□□□□ -0.47
LINC01546A6NGU7 AC006449.6-201ENST00000612330 2296 ntBASIC12.11□□□□□ -0.47
LINC01546A6NGU7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 AC010460.3-201ENST00000511359 1579 ntBASIC12.11□□□□□ -0.47
LINC01546A6NGU7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 ID1-201ENST00000376105 1233 ntBASIC12.11□□□□□ -0.47
LINC01546A6NGU7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 CCR12P-201ENST00000446203 998 ntBASIC12.11□□□□□ -0.47
LINC01546A6NGU7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 AC109462.3-201ENST00000573934 613 ntBASIC12.11□□□□□ -0.47
LINC01546A6NGU7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
LINC01546A6NGU7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms