Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 AC079140.1-201ENST00000508039 487 ntBASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 RN7SL589P-201ENST00000481268 310 ntBASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
CDK5RAP2Q96SN8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDK5RAP2Q96SN8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
CDK5RAP2Q96SN8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.02■□□□□ 0.8
CDK5RAP2Q96SN8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDK5RAP2Q96SN8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CDK5RAP2Q96SN8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDK5RAP2Q96SN8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CDK5RAP2Q96SN8 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CDK5RAP2Q96SN8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDK5RAP2Q96SN8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDK5RAP2Q96SN8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.02■□□□□ 0.8
CDK5RAP2Q96SN8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CDK5RAP2Q96SN8 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CDK5RAP2Q96SN8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDK5RAP2Q96SN8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.02■□□□□ 0.79
CDK5RAP2Q96SN8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 KRT18P28-201ENST00000453838 1332 ntBASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 AL161645.1-201ENST00000622716 1255 ntBASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDK5RAP2Q96SN8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20■□□□□ 0.79
CDK5RAP2Q96SN8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20■□□□□ 0.79
CDK5RAP2Q96SN8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDK5RAP2Q96SN8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CDK5RAP2Q96SN8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDK5RAP2Q96SN8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CDK5RAP2Q96SN8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CDK5RAP2Q96SN8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CDK5RAP2Q96SN8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CDK5RAP2Q96SN8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDK5RAP2Q96SN8 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20■□□□□ 0.79
CDK5RAP2Q96SN8 LINC02012-201ENST00000608206 1725 ntBASIC20■□□□□ 0.79
CDK5RAP2Q96SN8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDK5RAP2Q96SN8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDK5RAP2Q96SN8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDK5RAP2Q96SN8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CDK5RAP2Q96SN8 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDK5RAP2Q96SN8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDK5RAP2Q96SN8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDK5RAP2Q96SN8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20■□□□□ 0.79
CDK5RAP2Q96SN8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms