Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC093677.2-201ENST00000600169 1863 ntBASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 AL353779.1-201ENST00000434793 351 ntBASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 SPDYE12P-201ENST00000618416 771 ntBASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 AL031598.1-201ENST00000561511 1773 ntBASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 AC008735.3-201ENST00000596646 500 ntBASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 MIR6869-201ENST00000619434 62 ntBASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 AL096828.2-201ENST00000567259 1965 ntBASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 AC027369.6-201ENST00000525520 931 ntBASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 AC004790.1-201ENST00000612686 536 ntBASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CSMD1Q96PZ7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 MIR346-201ENST00000362234 95 ntBASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 TMEM261P1-201ENST00000604899 340 ntBASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 AC067852.2-201ENST00000590513 2313 ntBASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 AC020907.1-201ENST00000616460 1350 ntBASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 AP006294.1-201ENST00000415407 339 ntBASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.49□□□□□ -0.09
CSMD1Q96PZ7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms