Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 AC145285.3-201ENST00000564603 959 ntBASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 LINC02012-201ENST00000608206 1725 ntBASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.51■□□□□ 0.39
SHROOM3Q8TF72 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 PRORSD1P-202ENST00000563365 2154 ntBASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 LAGE3P1-201ENST00000425356 484 ntBASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 RNPS1P1-201ENST00000507437 918 ntBASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 IGHV3-22-201ENST00000520721 359 ntBASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 AC106730.1-201ENST00000566722 1090 ntBASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 AC107918.4-202ENST00000641623 219 ntBASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SHROOM3Q8TF72 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 AC108073.2-201ENST00000464002 357 ntBASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 RPL13AP23-201ENST00000480739 586 ntBASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 AC006557.2-201ENST00000592985 1240 ntBASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 AC136632.2-201ENST00000512891 861 ntBASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 AC011676.5-201ENST00000624864 2660 ntBASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SHROOM3Q8TF72 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
SHROOM3Q8TF72 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM3Q8TF72 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM3Q8TF72 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.48■□□□□ 0.39
SHROOM3Q8TF72 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM3Q8TF72 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM3Q8TF72 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SHROOM3Q8TF72 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM3Q8TF72 LINC00982-205ENST00000420957 435 ntBASIC17.48■□□□□ 0.39
SHROOM3Q8TF72 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.48■□□□□ 0.39
SHROOM3Q8TF72 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.48■□□□□ 0.39
SHROOM3Q8TF72 AL805961.1-202ENST00000641562 540 ntBASIC17.48■□□□□ 0.39
SHROOM3Q8TF72 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM3Q8TF72 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SHROOM3Q8TF72 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms