Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 CDK2AP2P3-201ENST00000422476 372 ntBASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 AL512343.1-201ENST00000605837 169 ntBASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 BCYRN1-201ENST00000418539 200 ntBASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 AC055876.2-201ENST00000531834 546 ntBASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 LINC00304-203ENST00000565008 1864 ntBASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ALMS1Q8TCU4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 POR-209ENST00000439269 1858 ntTSL 2 BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 MTND6P24-201ENST00000440466 518 ntBASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 RN7SL618P-201ENST00000477850 296 ntBASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 CD81-207ENST00000481687 890 ntTSL 2 BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 ZNF767P-206ENST00000513792 565 ntBASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC11.41□□□□□ -0.58
ALMS1Q8TCU4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 CROCCP4-201ENST00000457096 498 ntBASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 FAM8A2P-201ENST00000528813 1142 ntBASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC11.4□□□□□ -0.58
ALMS1Q8TCU4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms