Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC010331.1-201ENST00000611423 582 ntBASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 AC080080.1-201ENST00000625121 2420 ntBASIC14.3□□□□□ -0.12
ZNF439Q8NDP4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 AC046185.3-201ENST00000623228 1824 ntBASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 ATP5G2P1-201ENST00000433580 426 ntBASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 MINOS1P3-201ENST00000457048 203 ntBASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 AD001527.2-201ENST00000622994 785 ntBASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 INTS4P1-201ENST00000438455 1935 ntBASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 PCDHA12-202ENST00000613593 2588 ntBASIC14.29□□□□□ -0.12
ZNF439Q8NDP4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 ARMC10P1-201ENST00000313754 855 ntBASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF439Q8NDP4 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms