Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
DCLRE1AQ6PJP8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
DCLRE1AQ6PJP8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
DCLRE1AQ6PJP8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
DCLRE1AQ6PJP8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DCLRE1AQ6PJP8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.33■□□□□ 0.52
DCLRE1AQ6PJP8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DCLRE1AQ6PJP8 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.33■□□□□ 0.52
DCLRE1AQ6PJP8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DCLRE1AQ6PJP8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DCLRE1AQ6PJP8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 ACTG1P14-201ENST00000446382 1122 ntBASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 CEND1P1-201ENST00000451006 455 ntBASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 SNHG9-202ENST00000564014 471 ntBASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 MIR3197-201ENST00000582241 73 ntBASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DCLRE1AQ6PJP8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 AC254562.1-201ENST00000417586 456 ntBASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DCLRE1AQ6PJP8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 FAM58CP-201ENST00000435741 640 ntBASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 AL031432.2-201ENST00000566714 459 ntBASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 AL928711.1-201ENST00000570165 459 ntBASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DCLRE1AQ6PJP8 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms