Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN12P56749 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN12P56749 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN12P56749 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CLDN12P56749 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN12P56749 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN12P56749 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.03■□□□□ -0
CLDN12P56749 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN12P56749 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN12P56749 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CLDN12P56749 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CLDN12P56749 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
CLDN12P56749 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.02■□□□□ -0
CLDN12P56749 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN12P56749 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CLDN12P56749 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN12P56749 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.02■□□□□ -0
CLDN12P56749 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN12P56749 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN12P56749 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN12P56749 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN12P56749 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN12P56749 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN12P56749 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.02■□□□□ -0
CLDN12P56749 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.02■□□□□ -0
CLDN12P56749 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
CLDN12P56749 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.02■□□□□ -0
CLDN12P56749 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN12P56749 AL512604.3-201ENST00000569583 964 ntBASIC15.02■□□□□ -0
CLDN12P56749 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CLDN12P56749 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.02■□□□□ -0
CLDN12P56749 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.02■□□□□ -0
CLDN12P56749 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.02■□□□□ -0
CLDN12P56749 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.02■□□□□ -0
CLDN12P56749 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN12P56749 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CLDN12P56749 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN12P56749 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.02□□□□□ -0.01
CLDN12P56749 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN12P56749 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN12P56749 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN12P56749 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN12P56749 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN12P56749 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.02□□□□□ -0.01
CLDN12P56749 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN12P56749 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN12P56749 AC007950.2-201ENST00000615045 2347 ntBASIC15.01□□□□□ -0.01
CLDN12P56749 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN12P56749 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
CLDN12P56749 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN12P56749 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN12P56749 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN12P56749 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN12P56749 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN12P56749 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CLDN12P56749 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN12P56749 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN12P56749 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDN12P56749 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDN12P56749 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN12P56749 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN12P56749 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN12P56749 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN12P56749 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN12P56749 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN12P56749 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN12P56749 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN12P56749 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN12P56749 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.01□□□□□ -0.01
CLDN12P56749 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.01□□□□□ -0.01
CLDN12P56749 GCSHP2-201ENST00000560971 527 ntBASIC15.01□□□□□ -0.01
CLDN12P56749 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN12P56749 AC010947.1-201ENST00000623454 693 ntBASIC15.01□□□□□ -0.01
CLDN12P56749 AC079602.3-201ENST00000623931 403 ntBASIC15.01□□□□□ -0.01
CLDN12P56749 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN12P56749 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CLDN12P56749 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN12P56749 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN12P56749 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CLDN12P56749 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.01□□□□□ -0.01
CLDN12P56749 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN12P56749 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN12P56749 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN12P56749 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15□□□□□ -0.01
CLDN12P56749 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
CLDN12P56749 AL391807.1-203ENST00000604392 2365 ntBASIC15□□□□□ -0.01
CLDN12P56749 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN12P56749 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN12P56749 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN12P56749 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLDN12P56749 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLDN12P56749 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN12P56749 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN12P56749 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15□□□□□ -0.01
CLDN12P56749 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLDN12P56749 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN12P56749 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN12P56749 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15□□□□□ -0.01
CLDN12P56749 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLDN12P56749 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms