Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH13P55290 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CDH13P55290 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH13P55290 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH13P55290 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH13P55290 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
CDH13P55290 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH13P55290 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH13P55290 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH13P55290 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH13P55290 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDH13P55290 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDH13P55290 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH13P55290 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH13P55290 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDH13P55290 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CDH13P55290 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH13P55290 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH13P55290 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CDH13P55290 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH13P55290 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH13P55290 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH13P55290 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH13P55290 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH13P55290 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CDH13P55290 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH13P55290 CHCHD2P8-201ENST00000429873 447 ntBASIC16.86■□□□□ 0.29
CDH13P55290 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CDH13P55290 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH13P55290 STK19B-204ENST00000512515 211 ntBASIC16.86■□□□□ 0.29
CDH13P55290 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH13P55290 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH13P55290 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH13P55290 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH13P55290 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH13P55290 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CDH13P55290 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH13P55290 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH13P55290 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CDH13P55290 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CDH13P55290 AL121956.5-201ENST00000625261 221 ntBASIC16.86■□□□□ 0.29
CDH13P55290 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CDH13P55290 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH13P55290 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH13P55290 AC132938.5-201ENST00000624980 1813 ntBASIC16.86■□□□□ 0.29
CDH13P55290 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH13P55290 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH13P55290 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH13P55290 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH13P55290 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH13P55290 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CDH13P55290 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH13P55290 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
CDH13P55290 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH13P55290 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH13P55290 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDH13P55290 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH13P55290 EGFEM1P-202ENST00000431685 1563 ntBASIC16.85■□□□□ 0.29
CDH13P55290 AC009336.1-201ENST00000608941 1553 ntBASIC16.85■□□□□ 0.29
CDH13P55290 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CDH13P55290 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH13P55290 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH13P55290 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDH13P55290 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDH13P55290 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH13P55290 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH13P55290 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CDH13P55290 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH13P55290 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDH13P55290 FAM86EP-206ENST00000510506 987 ntBASIC16.85■□□□□ 0.29
CDH13P55290 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH13P55290 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH13P55290 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.85■□□□□ 0.29
CDH13P55290 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.85■□□□□ 0.29
CDH13P55290 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH13P55290 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CDH13P55290 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH13P55290 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH13P55290 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH13P55290 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.85■□□□□ 0.29
CDH13P55290 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH13P55290 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH13P55290 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
CDH13P55290 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.85■□□□□ 0.29
CDH13P55290 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH13P55290 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDH13P55290 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDH13P55290 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH13P55290 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.85■□□□□ 0.29
CDH13P55290 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDH13P55290 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CDH13P55290 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH13P55290 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH13P55290 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDH13P55290 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH13P55290 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH13P55290 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH13P55290 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDH13P55290 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDH13P55290 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms