Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNA4P43681 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA4P43681 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA4P43681 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA4P43681 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.36■□□□□ 0.37
CHRNA4P43681 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNA4P43681 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
CHRNA4P43681 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA4P43681 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA4P43681 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA4P43681 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.36■□□□□ 0.37
CHRNA4P43681 AC021087.4-201ENST00000563761 564 ntBASIC17.36■□□□□ 0.37
CHRNA4P43681 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNA4P43681 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNA4P43681 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CHRNA4P43681 AC025062.2-201ENST00000605477 670 ntBASIC17.36■□□□□ 0.37
CHRNA4P43681 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHRNA4P43681 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA4P43681 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHRNA4P43681 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA4P43681 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.36■□□□□ 0.37
CHRNA4P43681 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA4P43681 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.36■□□□□ 0.37
CHRNA4P43681 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA4P43681 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA4P43681 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA4P43681 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CHRNA4P43681 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHRNA4P43681 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 AC099398.1-201ENST00000567919 2776 ntBASIC17.35■□□□□ 0.37
CHRNA4P43681 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CHRNA4P43681 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.35■□□□□ 0.37
CHRNA4P43681 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CHRNA4P43681 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CHRNA4P43681 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 AC106886.4-201ENST00000623557 2502 ntBASIC17.35■□□□□ 0.37
CHRNA4P43681 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.35■□□□□ 0.37
CHRNA4P43681 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CHRNA4P43681 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.35■□□□□ 0.37
CHRNA4P43681 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.35■□□□□ 0.37
CHRNA4P43681 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.35■□□□□ 0.37
CHRNA4P43681 AL691432.3-201ENST00000621860 400 ntBASIC17.35■□□□□ 0.37
CHRNA4P43681 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CHRNA4P43681 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.35■□□□□ 0.37
CHRNA4P43681 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CHRNA4P43681 NKILA-202ENST00000614771 2598 ntBASIC17.35■□□□□ 0.37
CHRNA4P43681 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CHRNA4P43681 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 AC011676.5-201ENST00000624864 2660 ntBASIC17.35■□□□□ 0.37
CHRNA4P43681 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.35■□□□□ 0.37
CHRNA4P43681 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CHRNA4P43681 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CHRNA4P43681 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.35■□□□□ 0.37
CHRNA4P43681 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CHRNA4P43681 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHRNA4P43681 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA4P43681 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA4P43681 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA4P43681 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA4P43681 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA4P43681 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA4P43681 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA4P43681 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA4P43681 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA4P43681 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
CHRNA4P43681 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.34■□□□□ 0.37
CHRNA4P43681 GPR89P-201ENST00000407924 1495 ntBASIC17.34■□□□□ 0.37
CHRNA4P43681 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA4P43681 AL450487.1-201ENST00000426799 995 ntBASIC17.34■□□□□ 0.37
CHRNA4P43681 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA4P43681 FRMD8P1-201ENST00000440433 1524 ntBASIC17.34■□□□□ 0.37
CHRNA4P43681 AC079781.3-201ENST00000449110 356 ntBASIC17.34■□□□□ 0.37
CHRNA4P43681 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA4P43681 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.34■□□□□ 0.37
CHRNA4P43681 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.34■□□□□ 0.37
CHRNA4P43681 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CHRNA4P43681 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA4P43681 RN7SL510P-201ENST00000581311 263 ntBASIC17.34■□□□□ 0.37
CHRNA4P43681 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHRNA4P43681 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms