Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.12■□□□□ 0.33
HMGCLP35914 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HMGCLP35914 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.12■□□□□ 0.33
HMGCLP35914 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HMGCLP35914 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HMGCLP35914 AF228730.7-201ENST00000641842 219 ntBASIC17.12■□□□□ 0.33
HMGCLP35914 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
HMGCLP35914 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCLP35914 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCLP35914 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.12■□□□□ 0.33
HMGCLP35914 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCLP35914 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCLP35914 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGCLP35914 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
HMGCLP35914 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCLP35914 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCLP35914 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGCLP35914 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCLP35914 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCLP35914 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HMGCLP35914 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HMGCLP35914 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HMGCLP35914 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCLP35914 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCLP35914 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCLP35914 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HMGCLP35914 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCLP35914 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.11■□□□□ 0.33
HMGCLP35914 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCLP35914 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.11■□□□□ 0.33
HMGCLP35914 PAWRP1-201ENST00000451083 565 ntBASIC17.11■□□□□ 0.33
HMGCLP35914 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.11■□□□□ 0.33
HMGCLP35914 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCLP35914 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.11■□□□□ 0.33
HMGCLP35914 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGCLP35914 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGCLP35914 AL049840.3-201ENST00000602669 611 ntBASIC17.11■□□□□ 0.33
HMGCLP35914 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HMGCLP35914 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCLP35914 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCLP35914 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HMGCLP35914 AC243591.1-201ENST00000452967 1364 ntBASIC17.11■□□□□ 0.33
HMGCLP35914 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGCLP35914 AC012313.1-201ENST00000593393 3059 ntBASIC17.11■□□□□ 0.33
HMGCLP35914 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCLP35914 AC060834.1-201ENST00000443027 2032 ntBASIC17.11■□□□□ 0.33
HMGCLP35914 AP002414.3-201ENST00000589352 1468 ntBASIC17.11■□□□□ 0.33
HMGCLP35914 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
HMGCLP35914 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGCLP35914 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGCLP35914 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCLP35914 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.1■□□□□ 0.33
HMGCLP35914 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCLP35914 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HMGCLP35914 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCLP35914 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCLP35914 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCLP35914 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HMGCLP35914 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCLP35914 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCLP35914 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCLP35914 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCLP35914 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCLP35914 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.1■□□□□ 0.33
HMGCLP35914 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.1■□□□□ 0.33
HMGCLP35914 RPS15P9-201ENST00000494093 319 ntBASIC17.1■□□□□ 0.33
HMGCLP35914 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.1■□□□□ 0.33
HMGCLP35914 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.1■□□□□ 0.33
HMGCLP35914 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.1■□□□□ 0.33
HMGCLP35914 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
HMGCLP35914 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.1■□□□□ 0.33
HMGCLP35914 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.1■□□□□ 0.33
HMGCLP35914 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.1■□□□□ 0.33
HMGCLP35914 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.1■□□□□ 0.33
HMGCLP35914 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCLP35914 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCLP35914 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HMGCLP35914 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCLP35914 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCLP35914 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HMGCLP35914 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HMGCLP35914 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.1■□□□□ 0.33
HMGCLP35914 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HMGCLP35914 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.1■□□□□ 0.33
HMGCLP35914 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGCLP35914 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.09■□□□□ 0.33
HMGCLP35914 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGCLP35914 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCLP35914 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HMGCLP35914 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HMGCLP35914 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGCLP35914 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.09■□□□□ 0.33
HMGCLP35914 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.09■□□□□ 0.33
HMGCLP35914 AC026396.1-201ENST00000419388 421 ntBASIC17.09■□□□□ 0.33
HMGCLP35914 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HMGCLP35914 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
HMGCLP35914 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HMGCLP35914 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.09■□□□□ 0.33
HMGCLP35914 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.09■□□□□ 0.33
HMGCLP35914 AC008667.4-201ENST00000607370 168 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms