Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RORAP35398 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RORAP35398 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.37■□□□□ 0.21
RORAP35398 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.37■□□□□ 0.21
RORAP35398 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.37■□□□□ 0.21
RORAP35398 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.37■□□□□ 0.21
RORAP35398 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
RORAP35398 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.37■□□□□ 0.21
RORAP35398 AL139327.4-201ENST00000612362 153 ntBASIC16.37■□□□□ 0.21
RORAP35398 AC010654.1-201ENST00000615722 808 ntBASIC16.37■□□□□ 0.21
RORAP35398 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
RORAP35398 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RORAP35398 AC046185.3-201ENST00000623228 1824 ntBASIC16.37■□□□□ 0.21
RORAP35398 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RORAP35398 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RORAP35398 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.37■□□□□ 0.21
RORAP35398 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RORAP35398 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RORAP35398 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.36■□□□□ 0.21
RORAP35398 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RORAP35398 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.36■□□□□ 0.21
RORAP35398 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.36■□□□□ 0.21
RORAP35398 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RORAP35398 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.36■□□□□ 0.21
RORAP35398 AL355312.1-201ENST00000407115 2176 ntBASIC16.36■□□□□ 0.21
RORAP35398 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RORAP35398 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.36■□□□□ 0.21
RORAP35398 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RORAP35398 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
RORAP35398 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RORAP35398 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RORAP35398 MRPL20P1-201ENST00000400819 433 ntBASIC16.36■□□□□ 0.21
RORAP35398 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.36■□□□□ 0.21
RORAP35398 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.36■□□□□ 0.21
RORAP35398 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.36■□□□□ 0.21
RORAP35398 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RORAP35398 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.36■□□□□ 0.21
RORAP35398 AC112482.1-201ENST00000492080 688 ntBASIC16.36■□□□□ 0.21
RORAP35398 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RORAP35398 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RORAP35398 GGTLC5P-201ENST00000617623 998 ntBASIC16.36■□□□□ 0.21
RORAP35398 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RORAP35398 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RORAP35398 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RORAP35398 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.36■□□□□ 0.21
RORAP35398 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RORAP35398 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RORAP35398 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.36■□□□□ 0.21
RORAP35398 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.36■□□□□ 0.21
RORAP35398 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.36■□□□□ 0.21
RORAP35398 AC133963.1-201ENST00000504166 1679 ntBASIC16.36■□□□□ 0.21
RORAP35398 AL135999.2-201ENST00000622438 1686 ntBASIC16.36■□□□□ 0.21
RORAP35398 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RORAP35398 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.36■□□□□ 0.21
RORAP35398 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.36■□□□□ 0.21
RORAP35398 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
RORAP35398 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.36■□□□□ 0.21
RORAP35398 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.36■□□□□ 0.21
RORAP35398 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RORAP35398 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RORAP35398 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.35■□□□□ 0.21
RORAP35398 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
RORAP35398 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RORAP35398 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RORAP35398 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RORAP35398 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RORAP35398 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RORAP35398 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RORAP35398 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RORAP35398 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RORAP35398 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.35■□□□□ 0.21
RORAP35398 IGLL3P-201ENST00000412472 434 ntBASIC16.35■□□□□ 0.21
RORAP35398 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RORAP35398 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.35■□□□□ 0.21
RORAP35398 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.35■□□□□ 0.21
RORAP35398 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.35■□□□□ 0.21
RORAP35398 MIR3687-2-201ENST00000577708 61 ntBASIC16.35■□□□□ 0.21
RORAP35398 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.35■□□□□ 0.21
RORAP35398 MTDHP5-201ENST00000598980 586 ntBASIC16.35■□□□□ 0.21
RORAP35398 MIR3687-1-201ENST00000614492 61 ntBASIC16.35■□□□□ 0.21
RORAP35398 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RORAP35398 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RORAP35398 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RORAP35398 AL590787.1-201ENST00000568856 1315 ntBASIC16.35■□□□□ 0.21
RORAP35398 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RORAP35398 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RORAP35398 AC002310.6-201ENST00000624451 1377 ntBASIC16.35■□□□□ 0.21
RORAP35398 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RORAP35398 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RORAP35398 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
RORAP35398 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
RORAP35398 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RORAP35398 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RORAP35398 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RORAP35398 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RORAP35398 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RORAP35398 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RORAP35398 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RORAP35398 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RORAP35398 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms