Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 OR7E47P-204ENST00000575924 449 ntBASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 AC007064.4-201ENST00000637740 555 ntBASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 AC046185.3-201ENST00000623228 1824 ntBASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.23■□□□□ 0.19
RAB40ALP0C0E4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 PI4KAP1-204ENST00000612579 1703 ntBASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 DNAJB3-202ENST00000449667 1266 ntBASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 PDPK2P-202ENST00000562415 1191 ntBASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 AL513190.1-201ENST00000621254 727 ntBASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 AC010507.1-201ENST00000633895 436 ntBASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
RAB40ALP0C0E4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 HTR5BP-201ENST00000430851 1154 ntBASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 MIR4469-201ENST00000583919 79 ntBASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 AL139327.4-201ENST00000612362 153 ntBASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 AC004877.2-201ENST00000623941 599 ntBASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RAB40ALP0C0E4 AL135999.2-201ENST00000622438 1686 ntBASIC16.21■□□□□ 0.18
RAB40ALP0C0E4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
RAB40ALP0C0E4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.2■□□□□ 0.18
RAB40ALP0C0E4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms