Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CAPN8A6NHC0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 AC046185.3-201ENST00000623228 1824 ntBASIC17.51■□□□□ 0.39
CAPN8A6NHC0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 SART3-203ENST00000546611 1184 ntBASIC17.51■□□□□ 0.39
CAPN8A6NHC0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 TP73-AS1-207ENST00000624167 988 ntBASIC17.51■□□□□ 0.39
CAPN8A6NHC0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 AF228730.7-201ENST00000641842 219 ntBASIC17.51■□□□□ 0.39
CAPN8A6NHC0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CAPN8A6NHC0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 AL118508.1-201ENST00000613502 2345 ntBASIC17.5■□□□□ 0.39
CAPN8A6NHC0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.5■□□□□ 0.39
CAPN8A6NHC0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 NKAPP1-205ENST00000585790 367 ntBASIC17.5■□□□□ 0.39
CAPN8A6NHC0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN8A6NHC0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 BX005266.1-201ENST00000473402 457 ntBASIC17.49■□□□□ 0.39
CAPN8A6NHC0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN8A6NHC0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms