Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhgc5Q91XW9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Pcdhgc5Q91XW9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhgc5Q91XW9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdhgc5Q91XW9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhgc5Q91XW9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhgc5Q91XW9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Pcdhgc5Q91XW9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Pcdhgc5Q91XW9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Pcdhgc5Q91XW9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC25.02■■□□□ 1.6
Pcdhgc5Q91XW9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
Pcdhgc5Q91XW9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhgc5Q91XW9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhgc5Q91XW9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
Pcdhgc5Q91XW9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC25.01■■□□□ 1.59
Pcdhgc5Q91XW9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Pcdhgc5Q91XW9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Pcdhgc5Q91XW9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdhgc5Q91XW9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Pcdhgc5Q91XW9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC25■■□□□ 1.59
Pcdhgc5Q91XW9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Pcdhgc5Q91XW9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhgc5Q91XW9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhgc5Q91XW9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhgc5Q91XW9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC24.98■■□□□ 1.59
Pcdhgc5Q91XW9 Gm42501-201ENSMUST00000200220 1026 ntBASIC24.98■■□□□ 1.59
Pcdhgc5Q91XW9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Pcdhgc5Q91XW9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Pcdhgc5Q91XW9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhgc5Q91XW9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdhgc5Q91XW9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Pcdhgc5Q91XW9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhgc5Q91XW9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhgc5Q91XW9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdhgc5Q91XW9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24.96■■□□□ 1.59
Pcdhgc5Q91XW9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.59
Pcdhgc5Q91XW9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC24.95■■□□□ 1.58
Pcdhgc5Q91XW9 AC117769.4-201ENSMUST00000225679 685 ntBASIC24.95■■□□□ 1.58
Pcdhgc5Q91XW9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
Pcdhgc5Q91XW9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhgc5Q91XW9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhgc5Q91XW9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhgc5Q91XW9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhgc5Q91XW9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhgc5Q91XW9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdhgc5Q91XW9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC24.93■■□□□ 1.58
Pcdhgc5Q91XW9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdhgc5Q91XW9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdhgc5Q91XW9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdhgc5Q91XW9 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.93■■□□□ 1.58
Pcdhgc5Q91XW9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.92■■□□□ 1.58
Pcdhgc5Q91XW9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhgc5Q91XW9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhgc5Q91XW9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhgc5Q91XW9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC24.92■■□□□ 1.58
Pcdhgc5Q91XW9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhgc5Q91XW9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhgc5Q91XW9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC24.91■■□□□ 1.58
Pcdhgc5Q91XW9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhgc5Q91XW9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhgc5Q91XW9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhgc5Q91XW9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.89■■□□□ 1.58
Pcdhgc5Q91XW9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
Pcdhgc5Q91XW9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Pcdhgc5Q91XW9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC24.89■■□□□ 1.58
Pcdhgc5Q91XW9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Pcdhgc5Q91XW9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Pcdhgc5Q91XW9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Pcdhgc5Q91XW9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Pcdhgc5Q91XW9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Pcdhgc5Q91XW9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Pcdhgc5Q91XW9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhgc5Q91XW9 Gm18755-201ENSMUST00000218030 1099 ntBASIC24.88■■□□□ 1.57
Pcdhgc5Q91XW9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhgc5Q91XW9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC24.88■■□□□ 1.57
Pcdhgc5Q91XW9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhgc5Q91XW9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhgc5Q91XW9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhgc5Q91XW9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhgc5Q91XW9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhgc5Q91XW9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.87■■□□□ 1.57
Pcdhgc5Q91XW9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC24.87■■□□□ 1.57
Pcdhgc5Q91XW9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhgc5Q91XW9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC24.87■■□□□ 1.57
Pcdhgc5Q91XW9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
Pcdhgc5Q91XW9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhgc5Q91XW9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhgc5Q91XW9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhgc5Q91XW9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhgc5Q91XW9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhgc5Q91XW9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhgc5Q91XW9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC24.86■■□□□ 1.57
Pcdhgc5Q91XW9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC24.85■■□□□ 1.57
Pcdhgc5Q91XW9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhgc5Q91XW9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdhgc5Q91XW9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC24.84■■□□□ 1.57
Pcdhgc5Q91XW9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdhgc5Q91XW9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdhgc5Q91XW9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Pcdhgc5Q91XW9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms