Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC13.7□□□□□ -0.22
Cystm1Q8K353 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC13.7□□□□□ -0.22
Cystm1Q8K353 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cystm1Q8K353 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC13.7□□□□□ -0.22
Cystm1Q8K353 Gm8093-201ENSMUST00000128935 1892 ntBASIC13.7□□□□□ -0.22
Cystm1Q8K353 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cystm1Q8K353 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cystm1Q8K353 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cystm1Q8K353 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cystm1Q8K353 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cystm1Q8K353 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cystm1Q8K353 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cystm1Q8K353 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cystm1Q8K353 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cystm1Q8K353 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cystm1Q8K353 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cystm1Q8K353 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cystm1Q8K353 Gm7432-201ENSMUST00000210343 879 ntBASIC13.68□□□□□ -0.22
Cystm1Q8K353 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cystm1Q8K353 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cystm1Q8K353 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cystm1Q8K353 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cystm1Q8K353 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cystm1Q8K353 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cystm1Q8K353 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC13.67□□□□□ -0.22
Cystm1Q8K353 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cystm1Q8K353 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cystm1Q8K353 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cystm1Q8K353 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cystm1Q8K353 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cystm1Q8K353 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cystm1Q8K353 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cystm1Q8K353 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cystm1Q8K353 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cystm1Q8K353 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cystm1Q8K353 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cystm1Q8K353 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC13.66□□□□□ -0.22
Cystm1Q8K353 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cystm1Q8K353 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cystm1Q8K353 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cystm1Q8K353 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cystm1Q8K353 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cystm1Q8K353 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cystm1Q8K353 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cystm1Q8K353 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cystm1Q8K353 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cystm1Q8K353 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cystm1Q8K353 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cystm1Q8K353 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cystm1Q8K353 Golph3-202ENSMUST00000226517 2359 ntBASIC13.64□□□□□ -0.23
Cystm1Q8K353 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cystm1Q8K353 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cystm1Q8K353 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cystm1Q8K353 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cystm1Q8K353 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cystm1Q8K353 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cystm1Q8K353 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cystm1Q8K353 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cystm1Q8K353 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Cystm1Q8K353 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC13.63□□□□□ -0.23
Cystm1Q8K353 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cystm1Q8K353 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cystm1Q8K353 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cystm1Q8K353 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cystm1Q8K353 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cystm1Q8K353 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cystm1Q8K353 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cystm1Q8K353 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cystm1Q8K353 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cystm1Q8K353 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cystm1Q8K353 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Cystm1Q8K353 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cystm1Q8K353 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cystm1Q8K353 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cystm1Q8K353 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC13.62□□□□□ -0.23
Cystm1Q8K353 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cystm1Q8K353 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cystm1Q8K353 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cystm1Q8K353 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cystm1Q8K353 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cystm1Q8K353 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cystm1Q8K353 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cystm1Q8K353 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cystm1Q8K353 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cystm1Q8K353 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cystm1Q8K353 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cystm1Q8K353 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Cystm1Q8K353 Gm15043-201ENSMUST00000118843 1543 ntBASIC13.6□□□□□ -0.23
Cystm1Q8K353 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cystm1Q8K353 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC13.6□□□□□ -0.23
Cystm1Q8K353 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cystm1Q8K353 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cystm1Q8K353 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Cystm1Q8K353 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cystm1Q8K353 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cystm1Q8K353 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cystm1Q8K353 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cystm1Q8K353 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cystm1Q8K353 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cystm1Q8K353 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms