Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim45Q6PFY8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.62■□□□□ 0.89
Trim45Q6PFY8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Trim45Q6PFY8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim45Q6PFY8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim45Q6PFY8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim45Q6PFY8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim45Q6PFY8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim45Q6PFY8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim45Q6PFY8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim45Q6PFY8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
Trim45Q6PFY8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim45Q6PFY8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim45Q6PFY8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Trim45Q6PFY8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Trim45Q6PFY8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim45Q6PFY8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim45Q6PFY8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.58■□□□□ 0.89
Trim45Q6PFY8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim45Q6PFY8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.58■□□□□ 0.89
Trim45Q6PFY8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim45Q6PFY8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim45Q6PFY8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.58■□□□□ 0.89
Trim45Q6PFY8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim45Q6PFY8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.58■□□□□ 0.88
Trim45Q6PFY8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim45Q6PFY8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim45Q6PFY8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim45Q6PFY8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.57■□□□□ 0.88
Trim45Q6PFY8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim45Q6PFY8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trim45Q6PFY8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim45Q6PFY8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim45Q6PFY8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim45Q6PFY8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim45Q6PFY8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim45Q6PFY8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim45Q6PFY8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim45Q6PFY8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim45Q6PFY8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim45Q6PFY8 Gm10420-201ENSMUST00000121713 882 ntBASIC20.55■□□□□ 0.88
Trim45Q6PFY8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trim45Q6PFY8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim45Q6PFY8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim45Q6PFY8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Trim45Q6PFY8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.54■□□□□ 0.88
Trim45Q6PFY8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim45Q6PFY8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim45Q6PFY8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim45Q6PFY8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim45Q6PFY8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim45Q6PFY8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim45Q6PFY8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim45Q6PFY8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim45Q6PFY8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Trim45Q6PFY8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim45Q6PFY8 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.52■□□□□ 0.88
Trim45Q6PFY8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim45Q6PFY8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim45Q6PFY8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.51■□□□□ 0.87
Trim45Q6PFY8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim45Q6PFY8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim45Q6PFY8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Trim45Q6PFY8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim45Q6PFY8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Trim45Q6PFY8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim45Q6PFY8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim45Q6PFY8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim45Q6PFY8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.5■□□□□ 0.87
Trim45Q6PFY8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim45Q6PFY8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Trim45Q6PFY8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim45Q6PFY8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim45Q6PFY8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim45Q6PFY8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim45Q6PFY8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim45Q6PFY8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim45Q6PFY8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim45Q6PFY8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim45Q6PFY8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim45Q6PFY8 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.48■□□□□ 0.87
Trim45Q6PFY8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim45Q6PFY8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim45Q6PFY8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim45Q6PFY8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.48■□□□□ 0.87
Trim45Q6PFY8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Trim45Q6PFY8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim45Q6PFY8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim45Q6PFY8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim45Q6PFY8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim45Q6PFY8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim45Q6PFY8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Trim45Q6PFY8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim45Q6PFY8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.47■□□□□ 0.87
Trim45Q6PFY8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim45Q6PFY8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.47■□□□□ 0.87
Trim45Q6PFY8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Trim45Q6PFY8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim45Q6PFY8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim45Q6PFY8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms