Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 NTE1YML059C 5040 nt6.68□□□□□ -1.34
RPA49Q01080 TSR3YOR006C 942 nt6.68□□□□□ -1.34
RPA49Q01080 CIR2YOR356W 1896 nt6.68□□□□□ -1.34
RPA49Q01080 AMD2YDR242W 1650 nt6.68□□□□□ -1.34
RPA49Q01080 TRR1YDR353W 960 nt6.67□□□□□ -1.34
RPA49Q01080 LCB3YJL134W 1230 nt6.67□□□□□ -1.34
RPA49Q01080 KTR1YOR099W 1182 nt6.67□□□□□ -1.34
RPA49Q01080 ARG81YML099C 2643 nt6.66□□□□□ -1.34
RPA49Q01080 CTF8YHR191C 402 nt6.66□□□□□ -1.34
RPA49Q01080 QCR8YJL166W 285 nt6.66□□□□□ -1.34
RPA49Q01080 POP5YAL033W 522 nt6.66□□□□□ -1.34
RPA49Q01080 ILV1YER086W 1731 nt6.66□□□□□ -1.34
RPA49Q01080 NHA1YLR138W 2958 nt6.66□□□□□ -1.34
RPA49Q01080 POX1YGL205W 2247 nt6.65□□□□□ -1.34
RPA49Q01080 YLR157W-EYLR157W-E 165 nt6.65□□□□□ -1.34
RPA49Q01080 HRQ1YDR291W 3234 nt6.65□□□□□ -1.34
RPA49Q01080 YDR387CYDR387C 1668 nt6.65□□□□□ -1.35
RPA49Q01080 YNL017CYNL017C 339 nt6.64□□□□□ -1.35
RPA49Q01080 YNL097W-AYNL097W-A 156 nt6.64□□□□□ -1.35
RPA49Q01080 YHL018WYHL018W 363 nt6.63□□□□□ -1.35
RPA49Q01080 ECM14YHR132C 1293 nt6.63□□□□□ -1.35
RPA49Q01080 YHR213W-AYHR213W-A 234 nt6.63□□□□□ -1.35
RPA49Q01080 PEX13YLR191W 1161 nt6.63□□□□□ -1.35
RPA49Q01080 IES2YNL215W 963 nt6.63□□□□□ -1.35
RPA49Q01080 EXG1YLR300W 1347 nt6.62□□□□□ -1.35
RPA49Q01080 YNL165WYNL165W 1221 nt6.62□□□□□ -1.35
RPA49Q01080 YMC1YPR058W 924 nt6.62□□□□□ -1.35
RPA49Q01080 YCR061WYCR061W 1896 nt6.62□□□□□ -1.35
RPA49Q01080 ICL2YPR006C 1728 nt6.62□□□□□ -1.35
RPA49Q01080 TIM22YDL217C 624 nt6.61□□□□□ -1.35
RPA49Q01080 RRP46YGR095C 672 nt6.61□□□□□ -1.35
RPA49Q01080 MCH1YDL054C 1461 nt6.6□□□□□ -1.35
RPA49Q01080 CRP1YHR146W 1398 nt6.6□□□□□ -1.35
RPA49Q01080 MAK31YCR020C-A 267 nt6.6□□□□□ -1.35
RPA49Q01080 YDR015CYDR015C 240 nt6.6□□□□□ -1.35
RPA49Q01080 AIM33YML087C 939 nt6.6□□□□□ -1.35
RPA49Q01080 BUD9YGR041W 1644 nt6.59□□□□□ -1.35
RPA49Q01080 YDL218WYDL218W 954 nt6.59□□□□□ -1.35
RPA49Q01080 YET3YDL072C 612 nt6.58□□□□□ -1.36
RPA49Q01080 TMT1YER175C 900 nt6.58□□□□□ -1.36
RPA49Q01080 DMA1YHR115C 1251 nt6.58□□□□□ -1.36
RPA49Q01080 PRE3YJL001W 648 nt6.58□□□□□ -1.36
RPA49Q01080 PGM1YKL127W 1713 nt6.58□□□□□ -1.36
RPA49Q01080 EDC3YEL015W 1656 nt6.58□□□□□ -1.36
RPA49Q01080 YLL067CYLL067C 3618 nt6.57□□□□□ -1.36
RPA49Q01080 QRI5YLR204W 336 nt6.57□□□□□ -1.36
RPA49Q01080 TKL2YBR117C 2046 nt6.57□□□□□ -1.36
RPA49Q01080 ADE17YMR120C 1779 nt6.57□□□□□ -1.36
RPA49Q01080 RSP5YER125W 2430 nt6.56□□□□□ -1.36
RPA49Q01080 LDS1YAL018C 978 nt6.56□□□□□ -1.36
RPA49Q01080 BSC4YNL269W 396 nt6.56□□□□□ -1.36
RPA49Q01080 YNL285WYNL285W 372 nt6.56□□□□□ -1.36
RPA49Q01080 CAF40YNL288W 1122 nt6.56□□□□□ -1.36
RPA49Q01080 RRS1YOR294W 612 nt6.56□□□□□ -1.36
RPA49Q01080 YML133CYML133C 4125 nt6.56□□□□□ -1.36
RPA49Q01080 GEF1YJR040W 2340 nt6.55□□□□□ -1.36
RPA49Q01080 DOT5YIL010W 648 nt6.55□□□□□ -1.36
RPA49Q01080 RPS28AYOR167C 204 nt6.55□□□□□ -1.36
RPA49Q01080 GDA1YEL042W 1557 nt6.55□□□□□ -1.36
RPA49Q01080 ICL1YER065C 1674 nt6.55□□□□□ -1.36
RPA49Q01080 MOG1YJR074W 657 nt6.54□□□□□ -1.36
RPA49Q01080 ZRT2YLR130C 1269 nt6.54□□□□□ -1.36
RPA49Q01080 RPL21AYBR191W 483 nt6.54□□□□□ -1.36
RPA49Q01080 ELP3YPL086C 1674 nt6.54□□□□□ -1.36
RPA49Q01080 PYC2YBR218C 3543 nt6.54□□□□□ -1.36
RPA49Q01080 VPS61YDR136C 573 nt6.53□□□□□ -1.36
RPA49Q01080 REC114YMR133W 1287 nt6.53□□□□□ -1.36
RPA49Q01080 PHO3YBR092C 1404 nt6.52□□□□□ -1.37
RPA49Q01080 YGL235WYGL235W 537 nt6.52□□□□□ -1.37
RPA49Q01080 COA1YIL157C 594 nt6.52□□□□□ -1.37
RPA49Q01080 YIR042CYIR042C 711 nt6.52□□□□□ -1.37
RPA49Q01080 ASN2YGR124W 1719 nt6.52□□□□□ -1.37
RPA49Q01080 IVY1YDR229W 1362 nt6.52□□□□□ -1.37
RPA49Q01080 UTP4YDR324C 2331 nt6.51□□□□□ -1.37
RPA49Q01080 YOS9YDR057W 1629 nt6.51□□□□□ -1.37
RPA49Q01080 YHR070C-AYHR070C-A 411 nt6.51□□□□□ -1.37
RPA49Q01080 JNM1YMR294W 1122 nt6.51□□□□□ -1.37
RPA49Q01080 YTP1YNL237W 1380 nt6.51□□□□□ -1.37
RPA49Q01080 YCK1YHR135C 1617 nt6.5□□□□□ -1.37
RPA49Q01080 FRE5YOR384W 2085 nt6.5□□□□□ -1.37
RPA49Q01080 YDR278CYDR278C 318 nt6.5□□□□□ -1.37
RPA49Q01080 MED6YHR058C 888 nt6.5□□□□□ -1.37
RPA49Q01080 RPS5YJR123W 678 nt6.5□□□□□ -1.37
RPA49Q01080 DUS4YLR405W 1104 nt6.5□□□□□ -1.37
RPA49Q01080 MOD5YOR274W 1287 nt6.5□□□□□ -1.37
RPA49Q01080 MRPS16YPL013C 366 nt6.5□□□□□ -1.37
RPA49Q01080 ATP4YPL078C 735 nt6.5□□□□□ -1.37
RPA49Q01080 BUD32YGR262C 786 nt6.49□□□□□ -1.37
RPA49Q01080 GCV3YAL044C 513 nt6.49□□□□□ -1.37
RPA49Q01080 TSA1YML028W 591 nt6.49□□□□□ -1.37
RPA49Q01080 RGT2YDL138W 2292 nt6.49□□□□□ -1.37
RPA49Q01080 CHS5YLR330W 2016 nt6.49□□□□□ -1.37
RPA49Q01080 WHI2YOR043W 1461 nt6.48□□□□□ -1.37
RPA49Q01080 YDR034W-BYDR034W-B 156 nt6.48□□□□□ -1.37
RPA49Q01080 BCY1YIL033C 1251 nt6.48□□□□□ -1.37
RPA49Q01080 CSM2YIL132C 642 nt6.48□□□□□ -1.37
RPA49Q01080 SKS1YPL026C 1509 nt6.48□□□□□ -1.37
RPA49Q01080 SKY1YMR216C 2229 nt6.48□□□□□ -1.37
RPA49Q01080 MDM31YHR194W 1740 nt6.47□□□□□ -1.37
RPA49Q01080 CDC34YDR054C 888 nt6.47□□□□□ -1.37
Retrieved 100 of 7,029 protein–RNA pairs in 12 ms