Protein–RNA interactions for Protein: P47099

TY1A-JR2, Transposon Ty1-JR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-JR2P47099 ASP3-3YLR158C 1089 nt8.02□□□□□ -1.13
TY1A-JR2P47099 ASP3-4YLR160C 1089 nt8.02□□□□□ -1.13
TY1A-JR2P47099 YLR334CYLR334C 381 nt8.02□□□□□ -1.13
TY1A-JR2P47099 EAF7YNL136W 1278 nt8.02□□□□□ -1.13
TY1A-JR2P47099 SGT2YOR007C 1041 nt8.02□□□□□ -1.13
TY1A-JR2P47099 NPT1YOR209C 1290 nt8.02□□□□□ -1.13
TY1A-JR2P47099 AOS1YPR180W 1044 nt8.02□□□□□ -1.13
TY1A-JR2P47099 RET2YFR051C 1641 nt8.02□□□□□ -1.13
TY1A-JR2P47099 CNM67YNL225C 1746 nt8.01□□□□□ -1.13
TY1A-JR2P47099 LPL1YOR059C 1353 nt8.01□□□□□ -1.13
TY1A-JR2P47099 AIM6YDL237W 1173 nt8.01□□□□□ -1.13
TY1A-JR2P47099 MRP20YDR405W 792 nt8.01□□□□□ -1.13
TY1A-JR2P47099 TAN1YGL232W 870 nt8.01□□□□□ -1.13
TY1A-JR2P47099 LSC2YGR244C 1284 nt8.01□□□□□ -1.13
TY1A-JR2P47099 YHC3YJL059W 1227 nt8.01□□□□□ -1.13
TY1A-JR2P47099 ROX3YBL093C 663 nt8.01□□□□□ -1.13
TY1A-JR2P47099 GLO4YOR040W 858 nt8.01□□□□□ -1.13
TY1A-JR2P47099 SAS5YOR213C 747 nt8.01□□□□□ -1.13
TY1A-JR2P47099 YPR170W-AYPR170W-A 186 nt8.01□□□□□ -1.13
TY1A-JR2P47099 BI3Q0115 1554 nt8.01□□□□□ -1.13
TY1A-JR2P47099 HMS1YOR032C 1305 nt8.01□□□□□ -1.13
TY1A-JR2P47099 WTM1YOR230W 1314 nt8.01□□□□□ -1.13
TY1A-JR2P47099 ALG1YBR110W 1350 nt8□□□□□ -1.13
TY1A-JR2P47099 YDL172CYDL172C 480 nt8□□□□□ -1.13
TY1A-JR2P47099 SPO74YGL170C 1242 nt8□□□□□ -1.13
TY1A-JR2P47099 YGL258W-AYGL258W-A 234 nt8□□□□□ -1.13
TY1A-JR2P47099 PFS1YHR185C 714 nt8□□□□□ -1.13
TY1A-JR2P47099 RPL10YLR075W 666 nt8□□□□□ -1.13
TY1A-JR2P47099 YML119WYML119W 1074 nt8□□□□□ -1.13
TY1A-JR2P47099 RRP7YCL031C 894 nt8□□□□□ -1.13
TY1A-JR2P47099 YBL086CYBL086C 1401 nt8□□□□□ -1.13
TY1A-JR2P47099 ACH1YBL015W 1581 nt8□□□□□ -1.13
TY1A-JR2P47099 YDR170W-AYDR170W-A 1323 nt8□□□□□ -1.13
TY1A-JR2P47099 YNL284C-AYNL284C-A 1323 nt8□□□□□ -1.13
TY1A-JR2P47099 UFO1YML088W 2007 nt8□□□□□ -1.13
TY1A-JR2P47099 BMH2YDR099W 822 nt7.99□□□□□ -1.13
TY1A-JR2P47099 FCF1YDR339C 570 nt7.99□□□□□ -1.13
TY1A-JR2P47099 ACT1YFL039C 1128 nt7.99□□□□□ -1.13
TY1A-JR2P47099 BAT2YJR148W 1131 nt7.99□□□□□ -1.13
TY1A-JR2P47099 DIF1YLR437C 402 nt7.99□□□□□ -1.13
TY1A-JR2P47099 YMR262WYMR262W 942 nt7.99□□□□□ -1.13
TY1A-JR2P47099 DYN3YMR299C 939 nt7.99□□□□□ -1.13
TY1A-JR2P47099 YBR071WYBR071W 636 nt7.99□□□□□ -1.13
TY1A-JR2P47099 RFC1YOR217W 2586 nt7.99□□□□□ -1.13
TY1A-JR2P47099 YCR108CYCR108C 192 nt7.98□□□□□ -1.13
TY1A-JR2P47099 NRG1YDR043C 696 nt7.98□□□□□ -1.13
TY1A-JR2P47099 TIM17YJL143W 477 nt7.98□□□□□ -1.13
TY1A-JR2P47099 YKL030WYKL030W 606 nt7.98□□□□□ -1.13
TY1A-JR2P47099 SFK1YKL051W 1062 nt7.98□□□□□ -1.13
TY1A-JR2P47099 YMR010WYMR010W 1218 nt7.98□□□□□ -1.13
TY1A-JR2P47099 MRPL16YBL038W 699 nt7.98□□□□□ -1.13
TY1A-JR2P47099 YNR061CYNR061C 660 nt7.98□□□□□ -1.13
TY1A-JR2P47099 GAL7YBR018C 1101 nt7.98□□□□□ -1.13
TY1A-JR2P47099 HIS3YOR202W 663 nt7.98□□□□□ -1.13
TY1A-JR2P47099 SPO19YPL130W 672 nt7.98□□□□□ -1.13
TY1A-JR2P47099 MET16YPR167C 786 nt7.98□□□□□ -1.13
TY1A-JR2P47099 MTO1YGL236C 2010 nt7.98□□□□□ -1.13
TY1A-JR2P47099 TRP2YER090W 1524 nt7.98□□□□□ -1.13
TY1A-JR2P47099 MRS6YOR370C 1812 nt7.97□□□□□ -1.13
TY1A-JR2P47099 IRC6YFR043C 714 nt7.97□□□□□ -1.13
TY1A-JR2P47099 YGL132WYGL132W 336 nt7.97□□□□□ -1.13
TY1A-JR2P47099 URA6YKL024C 615 nt7.97□□□□□ -1.13
TY1A-JR2P47099 SMD2YLR275W 333 nt7.97□□□□□ -1.13
TY1A-JR2P47099 PFK27YOL136C 1194 nt7.97□□□□□ -1.13
TY1A-JR2P47099 YOR283WYOR283W 693 nt7.97□□□□□ -1.13
TY1A-JR2P47099 YPL014WYPL014W 1146 nt7.97□□□□□ -1.13
TY1A-JR2P47099 UBA3YPR066W 900 nt7.97□□□□□ -1.13
TY1A-JR2P47099 MCH1YDL054C 1461 nt7.97□□□□□ -1.13
TY1A-JR2P47099 DXO1YDR370C 1329 nt7.97□□□□□ -1.13
TY1A-JR2P47099 COR1YBL045C 1374 nt7.97□□□□□ -1.13
TY1A-JR2P47099 MEP3YPR138C 1470 nt7.96□□□□□ -1.13
TY1A-JR2P47099 CUP1-1YHR053C 186 nt7.96□□□□□ -1.14
TY1A-JR2P47099 CUP1-2YHR055C 186 nt7.96□□□□□ -1.14
TY1A-JR2P47099 TIR3YIL011W 810 nt7.96□□□□□ -1.14
TY1A-JR2P47099 YOX1YML027W 1158 nt7.96□□□□□ -1.14
TY1A-JR2P47099 GNP1YDR508C 1992 nt7.96□□□□□ -1.14
TY1A-JR2P47099 RSA4YCR072C 1548 nt7.96□□□□□ -1.14
TY1A-JR2P47099 FDC1YDR539W 1512 nt7.96□□□□□ -1.14
TY1A-JR2P47099 HXT10YFL011W 1641 nt7.96□□□□□ -1.14
TY1A-JR2P47099 ADE16YLR028C 1776 nt7.95□□□□□ -1.14
TY1A-JR2P47099 MSS2YDL107W 1056 nt7.95□□□□□ -1.14
TY1A-JR2P47099 GLC7YER133W 939 nt7.95□□□□□ -1.14
TY1A-JR2P47099 HGH1YGR187C 1185 nt7.95□□□□□ -1.14
TY1A-JR2P47099 AIM18YHR198C 966 nt7.95□□□□□ -1.14
TY1A-JR2P47099 HSP150YJL159W 1242 nt7.95□□□□□ -1.14
TY1A-JR2P47099 KTI12YKL110C 942 nt7.95□□□□□ -1.14
TY1A-JR2P47099 POM34YLR018C 900 nt7.95□□□□□ -1.14
TY1A-JR2P47099 YLR415CYLR415C 339 nt7.95□□□□□ -1.14
TY1A-JR2P47099 MAC1YMR021C 1254 nt7.95□□□□□ -1.14
TY1A-JR2P47099 SUB1YMR039C 879 nt7.95□□□□□ -1.14
TY1A-JR2P47099 SHE1YBL031W 1017 nt7.95□□□□□ -1.14
TY1A-JR2P47099 MPP6YNR024W 561 nt7.95□□□□□ -1.14
TY1A-JR2P47099 TPT1YOL102C 693 nt7.95□□□□□ -1.14
TY1A-JR2P47099 PNG1YPL096W 1092 nt7.95□□□□□ -1.14
TY1A-JR2P47099 snR19snR19 568 nt7.95□□□□□ -1.14
TY1A-JR2P47099 CLN2YPL256C 1638 nt7.95□□□□□ -1.14
TY1A-JR2P47099 GID8YMR135C 1368 nt7.95□□□□□ -1.14
TY1A-JR2P47099 PAP1YKR002W 1707 nt7.95□□□□□ -1.14
TY1A-JR2P47099 MDL2YPL270W 2322 nt7.94□□□□□ -1.14
TY1A-JR2P47099 URA3YEL021W 804 nt7.94□□□□□ -1.14
Retrieved 100 of 7,029 protein–RNA pairs in 43.7 ms