Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC52A1Q9NWF4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC24.4■■□□□ 1.5
SLC52A1Q9NWF4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SLC52A1Q9NWF4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
SLC52A1Q9NWF4 AC073389.1-201ENST00000595595 795 ntBASIC24.4■■□□□ 1.5
SLC52A1Q9NWF4 AL662799.1-202ENST00000614205 422 ntBASIC24.4■■□□□ 1.5
SLC52A1Q9NWF4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
SLC52A1Q9NWF4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SLC52A1Q9NWF4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC24.4■■□□□ 1.5
SLC52A1Q9NWF4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC52A1Q9NWF4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
SLC52A1Q9NWF4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC24.39■■□□□ 1.5
SLC52A1Q9NWF4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
SLC52A1Q9NWF4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SLC52A1Q9NWF4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SLC52A1Q9NWF4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SLC52A1Q9NWF4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SLC52A1Q9NWF4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC24.39■■□□□ 1.5
SLC52A1Q9NWF4 EGFEM1P-202ENST00000431685 1563 ntBASIC24.39■■□□□ 1.5
SLC52A1Q9NWF4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SLC52A1Q9NWF4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SLC52A1Q9NWF4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SLC52A1Q9NWF4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC24.39■■□□□ 1.49
SLC52A1Q9NWF4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC24.39■■□□□ 1.49
SLC52A1Q9NWF4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC24.39■■□□□ 1.49
SLC52A1Q9NWF4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SLC52A1Q9NWF4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC24.39■■□□□ 1.49
SLC52A1Q9NWF4 AC018529.1-201ENST00000613063 361 ntBASIC24.39■■□□□ 1.49
SLC52A1Q9NWF4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SLC52A1Q9NWF4 AP001350.2-201ENST00000625104 1094 ntBASIC24.39■■□□□ 1.49
SLC52A1Q9NWF4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC24.39■■□□□ 1.49
SLC52A1Q9NWF4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC24.39■■□□□ 1.49
SLC52A1Q9NWF4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SLC52A1Q9NWF4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC24.39■■□□□ 1.49
SLC52A1Q9NWF4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC24.39■■□□□ 1.49
SLC52A1Q9NWF4 ABALON-201ENST00000629058 1903 ntBASIC24.39■■□□□ 1.49
SLC52A1Q9NWF4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC24.39■■□□□ 1.49
SLC52A1Q9NWF4 AIRN-201ENST00000601203 4374 ntBASIC24.39■■□□□ 1.49
SLC52A1Q9NWF4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
SLC52A1Q9NWF4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 NME2P1-201ENST00000426182 414 ntBASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 AC027369.6-201ENST00000525520 931 ntBASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 MPDU1-223ENST00000582151 728 ntBASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
SLC52A1Q9NWF4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 CALY-202ENST00000368555 783 ntTSL 2 BASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 AL596325.1-201ENST00000563991 1082 ntBASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 RARRES2P9-201ENST00000565168 469 ntBASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 AC007967.4-201ENST00000614700 386 ntBASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 AC133963.1-201ENST00000504166 1679 ntBASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
SLC52A1Q9NWF4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC24.36■■□□□ 1.49
SLC52A1Q9NWF4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC24.36■■□□□ 1.49
SLC52A1Q9NWF4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLC52A1Q9NWF4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLC52A1Q9NWF4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLC52A1Q9NWF4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLC52A1Q9NWF4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLC52A1Q9NWF4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLC52A1Q9NWF4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLC52A1Q9NWF4 AC105233.2-201ENST00000523697 349 ntBASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms