Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16■□□□□ 0.15
UBQLN3Q9H347 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16■□□□□ 0.15
UBQLN3Q9H347 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16■□□□□ 0.15
UBQLN3Q9H347 AC019129.2-201ENST00000609837 1235 ntBASIC16■□□□□ 0.15
UBQLN3Q9H347 AC073592.4-201ENST00000623827 446 ntBASIC16■□□□□ 0.15
UBQLN3Q9H347 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
UBQLN3Q9H347 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBQLN3Q9H347 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
UBQLN3Q9H347 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16■□□□□ 0.15
UBQLN3Q9H347 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
UBQLN3Q9H347 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
UBQLN3Q9H347 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
UBQLN3Q9H347 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
UBQLN3Q9H347 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16■□□□□ 0.15
UBQLN3Q9H347 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16■□□□□ 0.15
UBQLN3Q9H347 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 HLA-A-201ENST00000376802 1334 ntBASIC15.99■□□□□ 0.15
UBQLN3Q9H347 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 AF186996.4-201ENST00000467186 377 ntBASIC15.99■□□□□ 0.15
UBQLN3Q9H347 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 AL773604.1-201ENST00000617417 272 ntBASIC15.99■□□□□ 0.15
UBQLN3Q9H347 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
UBQLN3Q9H347 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 AC079776.2-201ENST00000641154 1609 ntBASIC15.98■□□□□ 0.15
UBQLN3Q9H347 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 RNPS1P1-201ENST00000507437 918 ntBASIC15.98■□□□□ 0.15
UBQLN3Q9H347 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 SIGLEC16-201ENST00000599858 1437 ntBASIC15.98■□□□□ 0.15
UBQLN3Q9H347 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.98■□□□□ 0.15
UBQLN3Q9H347 AC148477.8-201ENST00000624298 468 ntBASIC15.98■□□□□ 0.15
UBQLN3Q9H347 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms