Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.46□□□□□ -0.09
CCL13Q99616 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CCL13Q99616 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCL13Q99616 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCL13Q99616 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
CCL13Q99616 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CCL13Q99616 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
CCL13Q99616 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CCL13Q99616 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.46□□□□□ -0.1
CCL13Q99616 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
CCL13Q99616 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCL13Q99616 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL13Q99616 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL13Q99616 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL13Q99616 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL13Q99616 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL13Q99616 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CCL13Q99616 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL13Q99616 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CCL13Q99616 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL13Q99616 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.45□□□□□ -0.1
CCL13Q99616 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL13Q99616 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.45□□□□□ -0.1
CCL13Q99616 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CCL13Q99616 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL13Q99616 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL13Q99616 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CCL13Q99616 NCF1C-201ENST00000438382 1427 ntBASIC14.45□□□□□ -0.1
CCL13Q99616 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CCL13Q99616 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL13Q99616 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.45□□□□□ -0.1
CCL13Q99616 OR7E14P-202ENST00000530490 1290 ntBASIC14.45□□□□□ -0.1
CCL13Q99616 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CCL13Q99616 AC139887.3-201ENST00000568585 713 ntBASIC14.45□□□□□ -0.1
CCL13Q99616 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.45□□□□□ -0.1
CCL13Q99616 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.45□□□□□ -0.1
CCL13Q99616 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CCL13Q99616 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.45□□□□□ -0.1
CCL13Q99616 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CCL13Q99616 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL13Q99616 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CCL13Q99616 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL13Q99616 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL13Q99616 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL13Q99616 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL13Q99616 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL13Q99616 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CCL13Q99616 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CCL13Q99616 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL13Q99616 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.44□□□□□ -0.1
CCL13Q99616 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL13Q99616 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL13Q99616 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL13Q99616 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL13Q99616 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL13Q99616 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL13Q99616 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CCL13Q99616 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL13Q99616 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CCL13Q99616 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL13Q99616 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CCL13Q99616 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL13Q99616 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL13Q99616 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CCL13Q99616 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL13Q99616 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL13Q99616 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL13Q99616 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CCL13Q99616 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.44□□□□□ -0.1
CCL13Q99616 MRPL3P1-201ENST00000400109 1033 ntBASIC14.44□□□□□ -0.1
CCL13Q99616 HNRNPDP1-201ENST00000439535 754 ntBASIC14.44□□□□□ -0.1
CCL13Q99616 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
CCL13Q99616 AC009078.2-202ENST00000463353 338 ntBASIC14.44□□□□□ -0.1
CCL13Q99616 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL13Q99616 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.44□□□□□ -0.1
CCL13Q99616 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL13Q99616 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.44□□□□□ -0.1
CCL13Q99616 AL589182.2-201ENST00000619332 1049 ntBASIC14.44□□□□□ -0.1
CCL13Q99616 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL13Q99616 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL13Q99616 AL645608.8-201ENST00000606034 2086 ntBASIC14.44□□□□□ -0.1
CCL13Q99616 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CCL13Q99616 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL13Q99616 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL13Q99616 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL13Q99616 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.44□□□□□ -0.1
CCL13Q99616 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL13Q99616 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL13Q99616 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL13Q99616 AC093525.9-201ENST00000624961 1746 ntBASIC14.44□□□□□ -0.1
CCL13Q99616 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL13Q99616 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.43□□□□□ -0.1
CCL13Q99616 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.43□□□□□ -0.1
CCL13Q99616 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL13Q99616 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL13Q99616 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCL13Q99616 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCL13Q99616 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CCL13Q99616 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL13Q99616 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms