Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL21A1Q96P44 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
COL21A1Q96P44 AC010460.3-201ENST00000511359 1579 ntBASIC16.33■□□□□ 0.2
COL21A1Q96P44 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.33■□□□□ 0.2
COL21A1Q96P44 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.33■□□□□ 0.2
COL21A1Q96P44 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.33■□□□□ 0.2
COL21A1Q96P44 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COL21A1Q96P44 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
COL21A1Q96P44 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.33■□□□□ 0.2
COL21A1Q96P44 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.33■□□□□ 0.2
COL21A1Q96P44 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COL21A1Q96P44 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL21A1Q96P44 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL21A1Q96P44 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COL21A1Q96P44 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.33■□□□□ 0.2
COL21A1Q96P44 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.32■□□□□ 0.2
COL21A1Q96P44 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
COL21A1Q96P44 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL21A1Q96P44 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL21A1Q96P44 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL21A1Q96P44 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL21A1Q96P44 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL21A1Q96P44 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL21A1Q96P44 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.32■□□□□ 0.2
COL21A1Q96P44 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
COL21A1Q96P44 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
COL21A1Q96P44 COX5BP2-201ENST00000392354 334 ntBASIC16.32■□□□□ 0.2
COL21A1Q96P44 FAM220CP-201ENST00000395253 831 ntBASIC16.32■□□□□ 0.2
COL21A1Q96P44 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.32■□□□□ 0.2
COL21A1Q96P44 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.32■□□□□ 0.2
COL21A1Q96P44 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.32■□□□□ 0.2
COL21A1Q96P44 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL21A1Q96P44 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
COL21A1Q96P44 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL21A1Q96P44 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.32■□□□□ 0.2
COL21A1Q96P44 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL21A1Q96P44 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.32■□□□□ 0.2
COL21A1Q96P44 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL21A1Q96P44 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.32■□□□□ 0.2
COL21A1Q96P44 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
COL21A1Q96P44 AC138894.3-201ENST00000603787 634 ntBASIC16.32■□□□□ 0.2
COL21A1Q96P44 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL21A1Q96P44 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.32■□□□□ 0.2
COL21A1Q96P44 AL139327.4-201ENST00000612362 153 ntBASIC16.32■□□□□ 0.2
COL21A1Q96P44 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.32■□□□□ 0.2
COL21A1Q96P44 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.32■□□□□ 0.2
COL21A1Q96P44 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL21A1Q96P44 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
COL21A1Q96P44 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL21A1Q96P44 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL21A1Q96P44 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL21A1Q96P44 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.32■□□□□ 0.2
COL21A1Q96P44 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL21A1Q96P44 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
COL21A1Q96P44 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
COL21A1Q96P44 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.31■□□□□ 0.2
COL21A1Q96P44 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.31■□□□□ 0.2
COL21A1Q96P44 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.31■□□□□ 0.2
COL21A1Q96P44 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
COL21A1Q96P44 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.31■□□□□ 0.2
COL21A1Q96P44 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.31■□□□□ 0.2
COL21A1Q96P44 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.31■□□□□ 0.2
COL21A1Q96P44 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
COL21A1Q96P44 AC011467.2-201ENST00000598425 242 ntBASIC16.31■□□□□ 0.2
COL21A1Q96P44 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.31■□□□□ 0.2
COL21A1Q96P44 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.31■□□□□ 0.2
COL21A1Q96P44 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.31■□□□□ 0.2
COL21A1Q96P44 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.31■□□□□ 0.2
COL21A1Q96P44 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
COL21A1Q96P44 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.31■□□□□ 0.2
COL21A1Q96P44 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL21A1Q96P44 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.31■□□□□ 0.2
COL21A1Q96P44 AC046158.3-201ENST00000624947 2558 ntBASIC16.31■□□□□ 0.2
COL21A1Q96P44 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL21A1Q96P44 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL21A1Q96P44 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms