Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AL356309.3-201ENST00000624132 1934 ntBASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 TUBB8P12-201ENST00000308911 1335 ntBASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 TUBB7P-202ENST00000428444 1305 ntBASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 TUBB8P7-204ENST00000567960 1332 ntBASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 AL590787.1-201ENST00000568856 1315 ntBASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 AL732292.2-201ENST00000609649 430 ntBASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 NCF1C-201ENST00000438382 1427 ntBASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 AC091304.2-201ENST00000564639 760 ntBASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 MTDHP3-201ENST00000594186 672 ntBASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 AL589182.2-201ENST00000619332 1049 ntBASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDLIM5Q96HC4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 BX005266.1-201ENST00000473402 457 ntBASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 AP002490.2-201ENST00000524791 560 ntBASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PDLIM5Q96HC4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms