Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF31Q96EP0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
RNF31Q96EP0 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RNF31Q96EP0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF31Q96EP0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF31Q96EP0 AC008764.6-201ENST00000595909 2069 ntBASIC16.66■□□□□ 0.26
RNF31Q96EP0 ABALON-201ENST00000629058 1903 ntBASIC16.66■□□□□ 0.26
RNF31Q96EP0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF31Q96EP0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF31Q96EP0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF31Q96EP0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF31Q96EP0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF31Q96EP0 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF31Q96EP0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF31Q96EP0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RNF31Q96EP0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF31Q96EP0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF31Q96EP0 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF31Q96EP0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF31Q96EP0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RNF31Q96EP0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RNF31Q96EP0 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF31Q96EP0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF31Q96EP0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF31Q96EP0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF31Q96EP0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF31Q96EP0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF31Q96EP0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF31Q96EP0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF31Q96EP0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF31Q96EP0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF31Q96EP0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF31Q96EP0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF31Q96EP0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF31Q96EP0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF31Q96EP0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF31Q96EP0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF31Q96EP0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RNF31Q96EP0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF31Q96EP0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF31Q96EP0 AC005104.2-201ENST00000427818 678 ntBASIC16.65■□□□□ 0.26
RNF31Q96EP0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF31Q96EP0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF31Q96EP0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF31Q96EP0 AC064836.3-201ENST00000607928 673 ntBASIC16.65■□□□□ 0.26
RNF31Q96EP0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.65■□□□□ 0.26
RNF31Q96EP0 AC005593.1-201ENST00000624894 515 ntBASIC16.65■□□□□ 0.26
RNF31Q96EP0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF31Q96EP0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF31Q96EP0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF31Q96EP0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
RNF31Q96EP0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF31Q96EP0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
RNF31Q96EP0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF31Q96EP0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF31Q96EP0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF31Q96EP0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF31Q96EP0 AC012317.2-201ENST00000623305 2251 ntBASIC16.65■□□□□ 0.26
RNF31Q96EP0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RNF31Q96EP0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.26
RNF31Q96EP0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.64■□□□□ 0.26
RNF31Q96EP0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.64■□□□□ 0.26
RNF31Q96EP0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
RNF31Q96EP0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF31Q96EP0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
RNF31Q96EP0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RNF31Q96EP0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF31Q96EP0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF31Q96EP0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF31Q96EP0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RNF31Q96EP0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RNF31Q96EP0 AL020989.1-201ENST00000422979 469 ntBASIC16.64■□□□□ 0.25
RNF31Q96EP0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF31Q96EP0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF31Q96EP0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF31Q96EP0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.64■□□□□ 0.25
RNF31Q96EP0 MIR4751-201ENST00000578027 74 ntBASIC16.64■□□□□ 0.25
RNF31Q96EP0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF31Q96EP0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF31Q96EP0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RNF31Q96EP0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
RNF31Q96EP0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF31Q96EP0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF31Q96EP0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF31Q96EP0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF31Q96EP0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RNF31Q96EP0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF31Q96EP0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RNF31Q96EP0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
RNF31Q96EP0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.64■□□□□ 0.25
RNF31Q96EP0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF31Q96EP0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF31Q96EP0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF31Q96EP0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF31Q96EP0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF31Q96EP0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF31Q96EP0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF31Q96EP0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF31Q96EP0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF31Q96EP0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms