Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SNRNP40Q96DI7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SNRNP40Q96DI7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SNRNP40Q96DI7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SNRNP40Q96DI7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SNRNP40Q96DI7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SNRNP40Q96DI7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SNRNP40Q96DI7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SNRNP40Q96DI7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SNRNP40Q96DI7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SNRNP40Q96DI7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SNRNP40Q96DI7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.44■□□□□ 0.06
SNRNP40Q96DI7 AKAP8P1-201ENST00000434743 1349 ntBASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 AC104581.1-202ENST00000635932 2618 ntBASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 AC107890.1-201ENST00000422478 521 ntBASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 GPS2P2-201ENST00000430745 888 ntBASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 KRT18P55-202ENST00000578578 1546 ntBASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SNRNP40Q96DI7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 AC125807.1-201ENST00000483097 614 ntBASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 AC107918.2-201ENST00000530817 355 ntBASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 MIR4515-201ENST00000584082 81 ntBASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SNRNP40Q96DI7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SNRNP40Q96DI7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms